RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 TRIM62Q9BVG3 475 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 KLC2Q9H0B6 622 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 UBN1Q9NPG3 1134 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 EIF3BP55884 814 aaKnown RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 IQCB1Q15051 598 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 CLEC10AQ8IUN9 316 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 GPATCH11Q8N954 259 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 RIT2Q99578 217 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 PDE11AQ9HCR9 933 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 FAM217BQ9NTX9 383 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 SUCLA2Q9P2R7 463 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 ARHGAP42A6NI28 874 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 ZBBXA8MT70 800 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 M0QYV0 167 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 MYBL1P10243 752 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 RECQLP46063 649 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 SEPT6Q14141 434 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 SH2D4BQ5SQS7 431 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 MCUQ8NE86 351 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 DHX38Q92620 1227 aaKnown RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 ACAP3Q96P50 834 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 KIAA1210Q9ULL0 1709 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 CCL15-CCL14A0A0B4J2E2 113 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 STXBP3O00186 592 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 SLC16A3O15427 465 aaKnown RBP9.71□□□□□ -0.85
PBRM1-208ENST00000410007 SUN1O94901 812 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 SLC4A1P02730 911 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 KRT3P12035 628 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 CCL15Q16663 113 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.85
PBRM1-208ENST00000410007 VPS39Q96JC1 886 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 TNIP3Q96KP6 325 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 EMSYQ7Z589 1322 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 REREQ9P2R6 1566 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 EXOC1LA0A1B0GW35 172 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 A8MXQ7 604 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 KRT7P08729 469 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.85
PBRM1-208ENST00000410007 ANTXR2P58335 489 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 RNF219Q5W0B1 726 aaPredicted RBP9.71□□□□□ -0.85
PBRM1-208ENST00000410007 C1orf228Q6PIY5 440 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 PASD1Q8IV76 773 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 GPRC5AQ8NFJ5 357 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 MORC4Q8TE76 937 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 PYROXD1Q8WU10 500 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 ZNF668Q96K58 619 aaPredicted RBP9.71□□□□□ -0.85
PBRM1-208ENST00000410007 JMJD4Q9H9V9 463 aa9.71□□□□□ -0.85
PBRM1-208ENST00000410007 ASAP2O43150 1006 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.86
PBRM1-208ENST00000410007 SART1O43290 800 aaKnown RBP9.71□□□□□ -0.86
PBRM1-208ENST00000410007 PALMO75781 387 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 RFC5P40937 340 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 PSMC1P62191 440 aaKnown RBP9.71□□□□□ -0.86
PBRM1-208ENST00000410007 TMED2Q15363 201 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 TRIP13Q15645 432 aaPredicted RBP9.71□□□□□ -0.86
PBRM1-208ENST00000410007 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 SCFD2Q8WU76 684 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 AP1M1Q9BXS5 423 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 ZMYND12Q9H0C1 365 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 SPATA31D1Q6ZQQ2 1576 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 TRAPPC3O43617 180 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 ZMYND10O75800 440 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 TRIM49P0CI25 452 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 TRIM49CP0CI26 452 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 PMLP29590 882 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 HUNKP57058 714 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 STX1BP61266 288 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 KCTD16Q68DU8 428 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 COL23A1Q86Y22 540 aaPredicted RBP9.71□□□□□ -0.86
PBRM1-208ENST00000410007 SCYL3Q8IZE3 742 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 GDAP1Q8TB36 358 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 C7orf25Q9BPX7 421 aa9.71□□□□□ -0.86
PBRM1-208ENST00000410007 RASGRF2O14827 1237 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 NMT1P30419 496 aaKnown RBP9.7□□□□□ -0.86
PBRM1-208ENST00000410007 TGFB2P61812 414 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 JADE1Q6IE81 842 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 PHLDB3Q6NSJ2 640 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 MYLK4Q86YV6 388 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-208ENST00000410007 ZNF564Q8TBZ8 553 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-208ENST00000410007 KLHL8Q9P2G9 620 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-208ENST00000410007 IP6K2Q9UHH9 426 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 BAG5Q9UL15 447 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 RIMS1Q86UR5 1692 aaKnown RBP9.7□□□□□ -0.86
PBRM1-208ENST00000410007 PREX1Q8TCU6 1659 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 C6orf222P0C671 652 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-208ENST00000410007 PAMP19021 973 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 IFNAR2P48551 515 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 MMEL1Q495T6 779 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 EMBQ6PCB8 327 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 PARD3BQ8TEW8 1205 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 MXRA8Q9BRK3 442 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 MTFR1LQ9H019 292 aa9.7□□□□□ -0.86
PBRM1-208ENST00000410007 MTIF3Q9H2K0 278 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms