RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 GTF3C6Q969F1 213 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 LXNQ9BS40 222 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 FAM105AQ9NUU6 356 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 RGL1Q9NZL6 768 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 KANSL3Q9P2N6 904 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 STK39Q9UEW8 545 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-210ENST00000409954 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-210ENST00000409954 PCDHGC5Q9Y5F6 944 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 LOC730098B7Z3J9 87 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 OFD1O75665 1012 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 LYPLA2O95372 231 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 CXCL14O95715 111 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 SRGAP2CP0DJJ0 459 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 LAMTOR4Q0VGL1 99 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 NR5A1Q13285 461 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 GIT2Q14161 759 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 MXD4Q14582 209 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 SMC1AQ14683 1233 aaKnown RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 CBX2Q14781 532 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 NOMO2Q5JPE7 1267 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 EARS2Q5JPH6 523 aaKnown RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 PLPP4Q5VZY2 271 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 NCAPH2Q6IBW4 605 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 TPH2Q8IWU9 490 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 ZNF579Q8NAF0 562 aaKnown RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 TNFRSF25Q93038 417 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 TMEM169Q96HH4 297 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 DYDC2Q96IM9 177 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 HSD17B14Q9BPX1 270 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 S1PR5Q9H228 398 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-210ENST00000409954 LOXHD1Q8IVV2 1947 aa16.21■□□□□ 0.19
MCF2L-210ENST00000409954 HIDE1A8MVS5 230 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 BTBD18B2RXH4 712 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 ALDH2P05091 517 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 AXLP30530 894 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 RNASELQ05823 741 aaKnown RBP16.2■□□□□ 0.18
MCF2L-210ENST00000409954 SPIRE1Q08AE8 756 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 CTTNQ14247 550 aaKnown RBP16.2■□□□□ 0.18
MCF2L-210ENST00000409954 CALCRLQ16602 461 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 ANKRD54Q6NXT1 300 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 TMEM87AQ8NBN3 555 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
MCF2L-210ENST00000409954 SUSD6Q92537 303 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 EDAQ92838 391 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 CASP10Q92851 521 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 TMEM143Q96AN5 459 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 EIF2AK1Q9BQI3 630 aaKnown RBP16.2■□□□□ 0.18
MCF2L-210ENST00000409954 UBN1Q9NPG3 1134 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 AGPAT5Q9NUQ2 364 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 PCDHB2Q9Y5E7 798 aa16.2■□□□□ 0.18
MCF2L-210ENST00000409954 C2orf71A6NGG8 1288 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 GALTP07902 379 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 HOXA11P31270 313 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-210ENST00000409954 PBX3P40426 434 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 TECP42680 631 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 SAFBQ15424 915 aaKnown RBP eCLIP16.19■□□□□ 0.18
MCF2L-210ENST00000409954 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 DDX53Q86TM3 631 aaKnown RBP16.19■□□□□ 0.18
MCF2L-210ENST00000409954 RNF149Q8NC42 400 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 VN1R2Q8NFZ6 395 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 URGCPQ8TCY9 931 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 MFSD14AQ96MC6 490 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 MTRQ99707 1265 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 KCNH6Q9H252 994 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 NRDE2Q9H7Z3 1164 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 TTC12Q9H892 705 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-210ENST00000409954 IRAK3Q9Y616 596 aa16.19■□□□□ 0.18
MCF2L-210ENST00000409954 NT5C1B-RDH14C9J2C7 533 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 DGAT1O75907 488 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 CYP4A11Q02928 519 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 ITIH3Q06033 890 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 TFDP1Q14186 410 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 EMC2Q15006 297 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
MCF2L-210ENST00000409954 VPS52Q8N1B4 723 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 LPPQ93052 612 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 IGSF21Q96ID5 467 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 TBC1D13Q9NVG8 400 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 MUTYHQ9UIF7 546 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 LIMCH1Q9UPQ0 1083 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 CNTNAP2Q9UHC6 1331 aa16.18■□□□□ 0.18
MCF2L-210ENST00000409954 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-210ENST00000409954 ZBTB39O15060 712 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 NEMFO60524 1076 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 DTNBO60941 627 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 ZC3H11AO75152 810 aaKnown RBP eCLIP16.17■□□□□ 0.18
MCF2L-210ENST00000409954 ERLIN2O94905 339 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 TXKP42681 527 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 PTENP60484 403 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 RBM10P98175 930 aaKnown RBP16.17■□□□□ 0.18
MCF2L-210ENST00000409954 LONRF3Q496Y0 759 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms