RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 HOXD13P35453 343 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 PSMC2P35998 433 aaKnown RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 ARHGAP25P42331 645 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 KLK7P49862 253 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 WNT7BP56706 349 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 PSMC5P62195 406 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 ITGB3BPQ13352 177 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 BAATQ14032 418 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 GNPTABQ3T906 1256 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 ODR4Q5SWX8 454 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 PDXDC1Q6P996 788 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 SLC30A10Q6XR72 485 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 SLC9A9Q8IVB4 645 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 FMNL3Q8IVF7 1028 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 DCPSQ96C86 337 aaKnown RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 DRC1Q96MC2 740 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 CCDC43Q96MW1 224 aaKnown RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 INPP4AQ96PE3 977 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 NAPGQ99747 312 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 GBP3Q9H0R5 595 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 ST6GALNAC4Q9H4F1 302 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 FBXO40Q9UH90 709 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 NFASCO94856 1347 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 FANCGO15287 622 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 ZBTB24O43167 697 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 USO1O60763 962 aaKnown RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 USP2O75604 605 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 MYCLP12524 364 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 ANXA13P27216 316 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 ABCD1P33897 745 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 RARRES1P49788 294 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 VAV2P52735 878 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 KIF5AQ12840 1032 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 PPP2R5AQ15172 486 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 SLC9C1Q4G0N8 1177 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 ZNF569Q5MCW4 686 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 RRAGAQ7L523 313 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 TAS1R3Q7RTX0 852 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 KIAA1328Q86T90 577 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 CEP112Q8N8E3 955 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 DNERQ8NFT8 737 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 UBXN4Q92575 508 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 HVCN1Q96D96 273 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 FIZ1Q96SL8 496 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 STRA6Q9BX79 667 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 WRAP73Q9P2S5 460 aaPredicted RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 KCNG1Q9UIX4 513 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 CDC23Q9UJX2 597 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 REXO2Q9Y3B8 237 aaKnown RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 CSADQ9Y600 493 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 BZW2Q9Y6E2 419 aaKnown RBP8.2□□□□□ -1.1
CXCR4-202ENST00000409817 LOC285556D6RIA3 1793 aa8.2□□□□□ -1.1
CXCR4-202ENST00000409817 COL11A1P12107 1806 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ANO9A1A5B4 782 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 LRRC53A6NM62 1247 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 NKRFO15226 690 aaKnown RBP eCLIP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 TGFB1I1O43294 461 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 HIP1RO75146 1068 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 TADA3O75528 432 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 AKAP3O75969 853 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SERPING1P05155 500 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 PLS3P13797 630 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SCP2P22307 547 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 IREB2P48200 963 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 HERVK_113P62684 666 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 MAPK7Q13164 816 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 DGKZQ13574 1117 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 TMEM132BQ14DG7 1078 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 CCDC122Q5T0U0 273 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SFMBT2Q5VUG0 894 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 OTUD6AQ7L8S5 288 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 C12orf56Q8IXR9 622 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ATP6V0A1Q93050 837 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 MOV10L1Q9BXT6 1211 aaKnown RBP8.19□□□□□ -1.1
CXCR4-202ENST00000409817 DEF6Q9H4E7 631 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 C17orf75Q9HAS0 396 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 DMAC2Q9NW81 257 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 CYP39A1Q9NYL5 469 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 AIPL1Q9NZN9 384 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 FRMD4BQ9Y2L6 1034 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 RIPK3Q9Y572 518 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 PCDHA10Q9Y5I2 948 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 PFASO15067 1338 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 MYH11P35749 1972 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 ZMYM2Q9UBW7 1377 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 RBAK-RBAKDNI3L0D1 243 aa8.19□□□□□ -1.1
CXCR4-202ENST00000409817 EPHB6O15197 1021 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms