RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 POP1Q99575 1024 aaKnown RBP8.08□□□□□ -1.12
SH3D19-203ENST00000409598 PCDHB9Q9Y5E1 797 aa8.08□□□□□ -1.12
SH3D19-203ENST00000409598 PCDHB6Q9Y5E3 794 aa8.08□□□□□ -1.12
SH3D19-203ENST00000409598 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 SLC9A3R1O14745 358 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 SRBD1Q8N5C6 995 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 ARNTL2Q8WYA1 636 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 TRPM5Q9NZQ8 1165 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 PTCH2Q9Y6C5 1203 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 V9GYY5 206 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 A0A1B0GVL5 298 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 CRCPO75575 148 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 BEX3Q00994 111 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 DNM1Q05193 864 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 STILQ15468 1287 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 NFE2Q16621 373 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 CTXN3Q4LDR2 81 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 PPP4R3CPQ6ZMV5 832 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 CCDC186Q7Z3E2 898 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF589Q86UQ0 364 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 GIMAP7Q8NHV1 300 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF668Q96K58 619 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 MMTAG2Q9BU76 263 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 HCN4Q9Y3Q4 1203 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 FGF19O95750 216 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 MMP1P03956 469 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 SLC12A2P55011 1212 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 COG7P83436 770 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 EIF2B5Q13144 721 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 NOL9Q5SY16 702 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 INTS8Q75QN2 995 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 C17orf53Q8N3J3 647 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF557Q8N988 423 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 MCOLN1Q9GZU1 580 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 TTLL13PA6NNM8 815 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 ABCB4P21439 1286 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 PAX3P23760 479 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 KLRC1P26715 233 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 DDIT3P35638 169 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 GABPB1Q06547 395 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 IFFO1Q0D2I5 559 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 TTC23LQ6PF05 361 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 PAWRQ96IZ0 340 aaKnown RBP8.07□□□□□ -1.12
SH3D19-203ENST00000409598 HHIPL1Q96JK4 782 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 PXMP2Q9NR77 195 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 RAB20Q9NX57 234 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 KCND2Q9NZV8 630 aa8.07□□□□□ -1.12
SH3D19-203ENST00000409598 KRT86O43790 486 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NPTXRO95502 500 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 CKMP06732 381 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 THP07101 528 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 MYL4P12829 197 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 BYSLQ13895 437 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 ATF7IP2Q5U623 682 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF410Q86VK4 478 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 TBC1D10CQ8IV04 446 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 PIGOQ8TEQ8 1089 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 SKA2Q8WVK7 121 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 CCDC51Q96ER9 411 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 PCIF1Q9H4Z3 704 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 SETD4Q9NVD3 440 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NCKAP1Q9Y2A7 1128 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NEDD4P46934 1319 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 STK36Q9NRP7 1315 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 SYNRGQ9UMZ2 1314 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NDUFS2O75306 463 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 FGFR2P21802 821 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 TBXAS1P24557 533 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 KCNH2Q12809 1159 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 KIAA1755Q5JYT7 1200 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NOP9Q86U38 636 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 RAB42Q8N4Z0 105 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 FBXO18Q8NFZ0 1043 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 ATP8B4Q8TF62 1192 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NELFBQ8WX92 580 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 XPO6Q96QU8 1125 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 PDGFDQ9GZP0 370 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 SLC16A4O15374 487 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 B3GAT3O94766 335 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 NR2F2P24468 414 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 TAF6P49848 677 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 SNW1Q13573 536 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 IRAK1BP1Q5VVH5 260 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 PCNX4Q63HM2 1172 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 TMC6Q7Z403 805 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 XXYLT1Q8NBI6 393 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 EIF2AK1Q9BQI3 630 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 TSGA10Q9BZW7 698 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 AGO2Q9UKV8 859 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 MYMKA6NI61 221 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 CLTAP09496 248 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 HARS2P49590 506 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 DDX42Q86XP3 938 aaKnown RBP eCLIP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms