RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 HDDC2Q7Z4H3 204 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 SFMBT1Q9UHJ3 866 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 MAP3K13O43283 966 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 SOX6P35712 828 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 ADRM1Q16186 407 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 PRG3Q9Y2Y8 225 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 PLCG1P19174 1290 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 IFT43Q96FT9 208 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 FAM32AQ9Y421 112 aaKnown RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 FAM47CQ5HY64 1035 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 MB21D1Q8N884 522 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 PSMA4P25789 261 aaKnown RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 JAK3P52333 1124 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 HACD3Q9P035 362 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 HEXIM2Q96MH2 286 aaKnown RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 MAP3K19Q56UN5 1328 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 RNF219Q5W0B1 726 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 COBLO75128 1261 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 SUPT3HO75486 399 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 SLC4A1P02730 911 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 KCNA3P22001 575 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 TEKT4Q8WW24 435 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 KCNJ6P48051 423 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 HIF1AQ16665 826 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 HSPH1Q92598 858 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 G2E3Q7L622 706 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 GINS4Q9BRT9 223 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 M0R3G1 203 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 HABP4Q5JVS0 413 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 ACBD5Q5T8D3 534 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 TSPAN17Q96FV3 270 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 PRPF18Q99633 342 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 KLHL2O95198 593 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 IL13P35225 146 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 CUL4AQ13619 759 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 EME1Q96AY2 570 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 MYH3P11055 1940 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 ARIH2O95376 493 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 AGTP01019 485 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 PLA2G4BP0C869 781 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 SLFN13Q68D06 897 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 B4GALNT2Q8NHY0 566 aa12.88□□□□□ -0.35
SHANK2-203ENST00000409161 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
SHANK2-203ENST00000409161 TRIP13Q15645 432 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 LRRC47Q8N1G4 583 aaKnown RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 KRT14P02533 472 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 EIF2S1P05198 315 aaKnown RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 ZNF18P17022 549 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 PTH1RQ03431 593 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 KIAA1841Q6NSI8 718 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 ANKS3Q6ZW76 656 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 C3orf20Q8ND61 904 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 ZNF839A8K0R7 811 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 PRPF3O43395 683 aaKnown RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 ROR1Q01973 937 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 HEATR6Q6AI08 1181 aaKnown RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 RIBC1Q8N443 379 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 FAM107AO95990 144 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 RALBP11234 206 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 BRAFP15056 766 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 GPS1Q13098 491 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 ADAM22Q9P0K1 906 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 TMEM191CA6NGB0 347 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 STRNO43815 780 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
SHANK2-203ENST00000409161 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 DDI1Q8WTU0 396 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 SYTL2Q9HCH5 934 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 VCAM1P19320 739 aa12.87□□□□□ -0.35
SHANK2-203ENST00000409161 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms