RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SLC7A3Q8WY07 619 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 NAPGQ99747 312 aaPredicted RBP20.67■□□□□ 0.9
USP39-202ENST00000409025 DHX33Q9H6R0 707 aaKnown RBP20.67■□□□□ 0.9
USP39-202ENST00000409025 AZI2Q9H6S1 392 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 TFR2Q9UP52 801 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 MRFAP1Q9Y605 127 aa20.67■□□□□ 0.9
USP39-202ENST00000409025 ANKRD63C9JTQ0 380 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 N4BP1O75113 896 aaKnown RBP20.66■□□□□ 0.9
USP39-202ENST00000409025 CNGA1P29973 690 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 GCLCP48506 637 aaPredicted RBP20.66■□□□□ 0.9
USP39-202ENST00000409025 CBWD6Q4V339 395 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 CBWD3Q5JTY5 395 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 CBWD5Q5RIA9 395 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 FBXO16Q8IX29 292 aaPredicted RBP20.66■□□□□ 0.9
USP39-202ENST00000409025 ANKRD13CQ8N6S4 541 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 MNS1Q8NEH6 495 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 BRI3BPQ8WY22 251 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 FAM167AQ96KS9 214 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 LACRTQ9GZZ8 138 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 RCCD1A6NED2 376 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 NOP56O00567 594 aaKnown RBP20.66■□□□□ 0.9
USP39-202ENST00000409025 CELF2O95319 508 aaKnown RBP20.66■□□□□ 0.9
USP39-202ENST00000409025 ARID5AQ03989 594 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 TUBB2AQ13885 445 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 TUBB2BQ9BVA1 445 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 ARHGAP28Q9P2N2 729 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 BZW2Q9Y6E2 419 aaKnown RBP20.66■□□□□ 0.9
USP39-202ENST00000409025 ADGRA3Q8IWK6 1321 aa20.66■□□□□ 0.9
USP39-202ENST00000409025 RBAK-RBAKDNI3L0D1 243 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 SCP2P22307 547 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 MAGEA1P43355 309 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 GFPT1Q06210 699 aaPredicted RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 NCBP1Q09161 790 aaKnown RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 CETN1Q12798 172 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 DHX37Q8IY37 1157 aaKnown RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 TMEM143Q96AN5 459 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 GPR20Q99678 358 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 LUC7LQ9NQ29 371 aaKnown RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 DAAM1Q9Y4D1 1078 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 PPME1Q9Y570 386 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 P4HA2O15460 535 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 ADSSP30520 456 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 RBM10P98175 930 aaKnown RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 TARBP2Q15633 366 aaKnown RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 BRDTQ58F21 947 aaPredicted RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 IQCEQ6IPM2 695 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 CEP89Q96ST8 783 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 CARD6Q9BX69 1037 aa20.65■□□□□ 0.9
USP39-202ENST00000409025 INTS2Q9H0H0 1204 aaKnown RBP20.65■□□□□ 0.9
USP39-202ENST00000409025 EMSYQ7Z589 1322 aa20.64■□□□□ 0.9
USP39-202ENST00000409025 GOLGA8IPA6NC78 632 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 GOLGA8JA6NMD2 632 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 ZBTB48P10074 688 aaPredicted RBP20.64■□□□□ 0.89
USP39-202ENST00000409025 ARL2P36404 184 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 NAMPTP43490 491 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 JAM2P57087 298 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 DLG4P78352 724 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 TTLL4Q14679 1199 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 SPRYD7Q5W111 196 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 CCDC62Q6P9F0 684 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 IRF2BP2Q7Z5L9 587 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 GLG1Q92896 1179 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 BICD1Q96G01 975 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 MORF4L1Q9UBU8 362 aa20.64■□□□□ 0.89
USP39-202ENST00000409025 HNRNPDLO14979 420 aaKnown RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 LGR5O75473 907 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 TXNP10599 105 aaKnown RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 NAA30Q147X3 362 aaPredicted RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 ENOX2Q16206 610 aaKnown RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 SNRNP35Q16560 246 aaKnown RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 HSDL1Q3SXM5 330 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 GJB7Q6PEY0 223 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ARMCX2Q7L311 632 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ZSWIM2Q8NEG5 633 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 BBXQ8WY36 941 aaPredicted RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 POMGNT1Q8WZA1 660 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 SECISBP2LQ93073 1101 aaKnown RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 SPATA33Q96N06 139 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.63■□□□□ 0.89
USP39-202ENST00000409025 MCM3APO60318 1980 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 PLXNB2O15031 1838 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 PJA2O43164 708 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 STRNO43815 780 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 GARTP22102 1010 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 GLRA2P23416 452 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ADORA2AP29274 412 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 STAT1P42224 750 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 MCCD1P59942 119 aaPredicted RBP20.63■□□□□ 0.89
USP39-202ENST00000409025 STRN3Q13033 797 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 SLC18A3Q16572 532 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ZNF792Q3KQV3 632 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 SLC39A4Q6P5W5 647 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 PLPPR4Q7Z2D5 763 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ABRAQ8N0Z2 381 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ZNF710Q8N1W2 664 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 DEPTORQ8TB45 409 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ASAP3Q8TDY4 903 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 SCFD2Q8WU76 684 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 ANKRD7Q92527 254 aa20.63■□□□□ 0.89
USP39-202ENST00000409025 KCNN1Q92952 543 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms