RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CASD1Q96PB1 797 aa14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 NACC1Q96RE7 527 aa14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 PRRX2Q99811 253 aa14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 LARP6Q9BRS8 491 aaKnown RBP14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 TMEM175Q9BSA9 504 aa14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 EMILIN2Q9BXX0 1053 aa14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 CHD9Q3L8U1 2897 aa14.31□□□□□ -0.12
SNORD88B-201ENST00000408454 ALDH2P05091 517 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 IL9P15248 144 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 CA8P35219 290 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 ZP2Q05996 745 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 LAMTOR4Q0VGL1 99 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 DUSP6Q16828 381 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 TMEM184AQ6ZMB5 413 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 FERMT3Q86UX7 667 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 RNF149Q8NC42 400 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 SMRP1Q8NCR6 262 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 PRPF31Q8WWY3 499 aaKnown RBP14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 MFSD14AQ96MC6 490 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 NECAB3Q96P71 396 aaPredicted RBP14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 EIF2AK1Q9BQI3 630 aaKnown RBP14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 ADPGKQ9BRR6 497 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 RSAD1Q9HA92 442 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 TTC28Q96AY4 2481 aa14.3□□□□□ -0.12
SNORD88B-201ENST00000408454 ZC3H11AO75152 810 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 SRGAP2CP0DJJ0 459 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 TXKP42681 527 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 MTHFRP42898 656 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 TMEM132AQ24JP5 1023 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 PLA2G4FQ68DD2 849 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 HAS1Q92839 578 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 FAM122AQ96E09 287 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 DYDC2Q96IM9 177 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 PHF7Q9BWX1 381 aaPredicted RBP14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 CWH43Q9H720 699 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 DBR1Q9UK59 544 aaKnown RBP14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 IRAK3Q9Y616 596 aa14.29□□□□□ -0.12
SNORD88B-201ENST00000408454 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 BTBD18B2RXH4 712 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 EML1O00423 815 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 C1RP00736 705 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 ITGA4P13612 1032 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 BCAR1P56945 870 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 CYP4A11Q02928 519 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 NR5A1Q13285 461 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 RABEP1Q15276 862 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 PLPP4Q5VZY2 271 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 DDX53Q86TM3 631 aaKnown RBP14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 RBM23Q86U06 439 aaKnown RBP14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 SLC39A11Q8N1S5 342 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 NECAB1Q8N987 351 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 MSLNLQ96KJ4 702 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 IFT74Q96LB3 600 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 IRF2BPLQ9H1B7 796 aa14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 PRMT7Q9NVM4 692 aaPredicted RBP14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
SNORD88B-201ENST00000408454 TRANK1O15050 2925 aa14.27□□□□□ -0.12
SNORD88B-201ENST00000408454 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 FSCN2O14926 492 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 TBX10O75333 385 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 SLITRK3O94933 977 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 STBD1O95210 358 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 CTDNEP1O95476 244 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 URODP06132 367 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 OR52Z1P0C646 297 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 NCLP19338 710 aaKnown RBP14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 MCM7P33993 719 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 LTBRP36941 435 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 EFNA5P52803 228 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 NPEPPSP55786 919 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 PTENP60484 403 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 CYP26C1Q6V0L0 522 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 MRPL10Q7Z7H8 261 aaKnown RBP14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 GPR65Q8IYL9 337 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 MRPL43Q8N983 215 aaKnown RBP14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 FBXO18Q8NFZ0 1043 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 OXER1Q8TDS5 423 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 RPS6KC1Q96S38 1066 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 CEP89Q96ST8 783 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 HSD17B14Q9BPX1 270 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 POLR3CQ9BUI4 534 aaPredicted RBP14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 IFT122Q9HBG6 1241 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 INPP5FQ9Y2H2 1132 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 FAN1Q9Y2M0 1017 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 GIT1Q9Y2X7 761 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 EVPLQ92817 2033 aa14.27□□□□□ -0.13
SNORD88B-201ENST00000408454 EDIL3O43854 480 aa14.26□□□□□ -0.13
SNORD88B-201ENST00000408454 CSPG5O95196 566 aa14.26□□□□□ -0.13
SNORD88B-201ENST00000408454 FDPSP14324 419 aaKnown RBP14.26□□□□□ -0.13
SNORD88B-201ENST00000408454 SCP2P22307 547 aa14.26□□□□□ -0.13
SNORD88B-201ENST00000408454 RPA1P27694 616 aa14.26□□□□□ -0.13
SNORD88B-201ENST00000408454 TECP42680 631 aa14.26□□□□□ -0.13
SNORD88B-201ENST00000408454 GATMP50440 423 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms