RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CCDC134Q9H6E4 229 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 CTNNAL1Q9UBT7 734 aa16.77■□□□□ 0.27
ATG4B-205ENST00000404914 RIPK2O43353 540 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 GH1P01241 217 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 PEX19P40855 299 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 BAG6P46379 1132 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 TNFAIP8L3Q5GJ75 292 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 SPDYCQ5MJ68 293 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 EPM2AIP1Q7L775 607 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 ADGRF4Q8IZF3 695 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 KCNV2Q8TDN2 545 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 TBC1D22AQ8WUA7 517 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 SYT11Q9BT88 431 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 TMEM110-MUSTN1A8MSY1 372 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 PPP1R12AO14974 1030 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 AGTP01019 485 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 KCNJ1P48048 391 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 MPP2Q14168 576 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 ZKSCAN8Q15776 578 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 CCDC25Q86WR0 208 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 CATSPER3Q86XQ3 398 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 FMNL3Q8IVF7 1028 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 FITM2Q8N6M3 262 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 ZNF622Q969S3 477 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■□□□ 11.6
ATG4B-205ENST00000404914 RMDN2Q96LZ7 410 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 NT5C3AQ9H0P0 336 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 CARD9Q9H257 536 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 SEPT11Q9NVA2 429 aaKnown RBP16.76■□□□□ 0.27
ATG4B-205ENST00000404914 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 SLC5A4Q9NY91 659 aa16.76■□□□□ 0.27
ATG4B-205ENST00000404914 CFAP73A6NFT4 308 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 LRRN2O75325 713 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 ABL2P42684 1182 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 PPP4CP60510 307 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 GRIK3Q13003 919 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-205ENST00000404914 TRAPPC3LQ5T215 181 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 VPS36Q86VN1 386 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■■□ 23.4
ATG4B-205ENST00000404914 P2RX7Q99572 595 aaKnown RBP16.75■□□□□ 0.27
ATG4B-205ENST00000404914 PTPN22Q9Y2R2 807 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 PFASO15067 1338 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 BAG3O95817 575 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 SMARCA1P28370 1054 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 MGAT5Q09328 741 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 COG2Q14746 738 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 SLC30A10Q6XR72 485 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 FAM167BQ9BTA0 163 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 RUSC1Q9BVN2 902 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 KIF9Q9HAQ2 790 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 INTUQ9ULD6 942 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 KDM3AQ9Y4C1 1321 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 RASGRF2O14827 1237 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 TMEM253P0C7T8 217 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 SOX5P35711 763 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 STAT1P42224 750 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 C6orf118Q5T5N4 469 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 CGB2Q6NT52 195 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 VSTM1Q6UX27 236 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 SEPT14Q6ZU15 432 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 GDAP1Q8TB36 358 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 KLHL29Q96CT2 875 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 NOP53Q9NZM5 478 aaKnown RBP16.75■□□□□ 0.27
ATG4B-205ENST00000404914 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
ATG4B-205ENST00000404914 USP15Q9Y4E8 981 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-205ENST00000404914 FAM187AA6NFU0 413 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 FERP16591 822 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 GCKP35557 465 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 BNIP1Q12981 228 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 NUGGCQ68CJ6 796 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-205ENST00000404914 ANKRD42Q8N9B4 389 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 CTNNBL1Q8WYA6 563 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-205ENST00000404914 DNAJC17Q9NVM6 304 aaKnown RBP16.74■□□□□ 0.27
ATG4B-205ENST00000404914 ADAM22Q9P0K1 906 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 ALG6Q9Y672 507 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 TMEM120BA0PK00 339 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 PHF2O75151 1096 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 AKR1B1P15121 316 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 ADCY2Q08462 1091 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 ADCY1Q08828 1119 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 TNIP1Q15025 636 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 CBWD6Q4V339 395 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 CBWD3Q5JTY5 395 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 CBWD5Q5RIA9 395 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 BORCS6Q96GS4 357 aa16.74■□□□□ 0.27
ATG4B-205ENST00000404914 GOLGA6L10A0A0M3HER8 536 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-205ENST00000404914 INHBEP58166 350 aa16.73■□□□□ 0.27
ATG4B-205ENST00000404914 COPS2P61201 443 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms