RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 GRHL1Q9NZI5 618 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 SLC12A4Q9UP95 1085 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 TOGARAM1Q9Y4F4 1720 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SPOPO43791 374 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 RTN2O75298 545 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SCNN1DP51172 638 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 EIF3BP55884 814 aaKnown RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SEMA3FQ13275 785 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 GNPTABQ3T906 1256 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 RASGEF1CQ8N431 466 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 NT5C3AQ9H0P0 336 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 RIOX1Q9H6W3 641 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 NOP53Q9NZM5 478 aaKnown RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 MTRF1LQ9UGC7 380 aaKnown RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 USP15Q9Y4E8 981 aaPredicted RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 BZW2Q9Y6E2 419 aaKnown RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 COMTP21964 271 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SOX5P35711 763 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 CHKAP35790 457 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 EPC2Q52LR7 807 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 CAPRIN2Q6IMN6 1127 aaKnown RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 CYP4F22Q6NT55 531 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 ARMC9Q7Z3E5 817 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 FMNL3Q8IVF7 1028 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 CYP4X1Q8N118 509 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 PARD3BQ8TEW8 1205 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 C9orf72Q96LT7 481 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 P2RX7Q99572 595 aaKnown RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 UBE2TQ9NPD8 197 aaPredicted RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 ASTN1O14525 1302 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 PFASO15067 1338 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 UBAP1LF5GYI3 381 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 CLDN3O15551 220 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 RIPK2O43353 540 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 CLSTN1O94985 981 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 BRAFP15056 766 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 STX2P32856 288 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 ZNF76P36508 570 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SLC12A3P55017 1021 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 TCP10Q12799 353 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 TAF11Q15544 211 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 SLFN11Q7Z7L1 901 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 HEMGNQ9BXL5 484 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 RTFDC1Q9BY42 306 aaPredicted RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 ZCWPW1Q9H0M4 648 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 ZNF287Q9HBT7 754 aa10.31□□□□□ -0.76
SMC1B-202ENST00000404354 NKX1-2Q9UD57 310 aaPredicted RBP10.31□□□□□ -0.76
SMC1B-202ENST00000404354 PLCH1Q4KWH8 1693 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 TOM1O60784 492 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 GHRP10912 638 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 PDE6CP51160 858 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 C6orf118Q5T5N4 469 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 LINC00116Q8NCU8 138 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 SLC30A5Q8TAD4 765 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 WDR66Q8TBY9 1149 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 NSRP1Q9H0G5 558 aaKnown RBP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 CDC42EP4Q9H3Q1 356 aaKnown RBP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 RASAL2Q9UJF2 1139 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 GSTTP1A0A1W2PQM5 241 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 CALUO43852 315 aaPredicted RBP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 FERP16591 822 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 MSH2P43246 934 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 DLG4P78352 724 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ANKRD20A2Q5SQ80 823 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 C10orf76Q5T2E6 689 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ANKRD20A1Q5TYW2 823 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ANKRD20A3Q5VUR7 823 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 LLGL2Q6P1M3 1020 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 FRMD5Q7Z6J6 570 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 TGS1Q96RS0 853 aaKnown RBP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 PNMA6FA0A0J9YX94 578 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 DDX39AO00148 427 aaKnown RBP10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ASAP2O43150 1006 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 UFL1O94874 794 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 SUN1O94901 812 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 FAM13AO94988 1023 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 YY1P25490 414 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 COPS2P61201 443 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 CALCOCO2Q13137 446 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 PHLDB3Q6NSJ2 640 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 VSIG1Q86XK7 387 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ZSWIM2Q8NEG5 633 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ANO3Q9BYT9 981 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 ANKRD2Q9GZV1 360 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 HAO1Q9UJM8 370 aa10.3□□□□□ -0.76
SMC1B-202ENST00000404354 A0A1B0GUL6 1792 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 PCNTO95613 3336 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 C6orf229H3BNL8 230 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 EML1O00423 815 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 TGFB1I1O43294 461 aa10.29□□□□□ -0.76
SMC1B-202ENST00000404354 PCK1P35558 622 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms