RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PADI3Q9ULW8 664 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 CCDC169A6NNP5 214 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 GTPBP6O43824 516 aaPredicted RBP32.39■■■□□ 2.78
USP42-202ENST00000404008 KINO60870 393 aaKnown RBP32.39■■■□□ 2.78
USP42-202ENST00000404008 ACRP10323 421 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 IDEP14735 1019 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 GAP43P17677 238 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 MBTD1Q05BQ5 628 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 C16orf59Q7L2K0 433 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 CCDC34Q96HJ3 373 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 ERVK-5Q9HDB9 667 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 PANK4Q9NVE7 773 aa32.39■■■□□ 2.78
USP42-202ENST00000404008 SFPQP23246 707 aaKnown RBP eCLIP32.38■■■□□ 2.77
USP42-202ENST00000404008 ZBTB8OSQ8IWT0 167 aa32.38■■■□□ 2.77
USP42-202ENST00000404008 CCDC65Q8IXS2 484 aa32.38■■■□□ 2.77
USP42-202ENST00000404008 DBF4BQ8NFT6 615 aa32.38■■■□□ 2.77
USP42-202ENST00000404008 SEPT8Q92599 483 aa32.38■■■□□ 2.77
USP42-202ENST00000404008 ST3GAL5Q9UNP4 418 aa32.38■■■□□ 2.77
USP42-202ENST00000404008 GPR182O15218 404 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 PRR29P0C7W0 189 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 FGFR4P22455 802 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 SMTNP53814 917 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 NCKAP1LP55160 1127 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 TCTN1Q2MV58 587 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 CNKSR3Q6P9H4 555 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 SFR1Q86XK3 245 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 FIZ1Q96SL8 496 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 GDF15Q99988 308 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 ARHGAP28Q9P2N2 729 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 SEL1LQ9UBV2 794 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 MICAL3Q7RTP6 2002 aa32.37■■■□□ 2.77
USP42-202ENST00000404008 INO80B-WBP1J3KQ70 363 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 SLC16A4O15374 487 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 TRAK2O60296 914 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 MCM4P33991 863 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 EFNA5P52803 228 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 UNC13DQ70J99 1090 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 APBB2Q92870 758 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 CCDC113Q9H0I3 377 aa32.36■■■□□ 2.77
USP42-202ENST00000404008 DPYDQ12882 1025 aa32.35■■■□□ 2.77
USP42-202ENST00000404008 NFX1Q12986 1120 aaKnown RBP32.35■■■□□ 2.77
USP42-202ENST00000404008 COASYQ13057 564 aa32.35■■■□□ 2.77
USP42-202ENST00000404008 POSTNQ15063 836 aa32.35■■■□□ 2.77
USP42-202ENST00000404008 PCBP1Q15365 356 aaKnown RBP eCLIP32.35■■■□□ 2.77
USP42-202ENST00000404008 PSRC1Q6PGN9 363 aaPredicted RBP32.35■■■□□ 2.77
USP42-202ENST00000404008 FAM178BQ8IXR5 827 aa32.35■■■□□ 2.77
USP42-202ENST00000404008 ELOA2Q8IYF1 753 aaPredicted RBP32.35■■■□□ 2.77
USP42-202ENST00000404008 TMEM161BQ8NDZ6 487 aa32.35■■■□□ 2.77
USP42-202ENST00000404008 PVALEFA0A1B0GWK0 134 aa32.34■■■□□ 2.77
USP42-202ENST00000404008 HERC4Q5GLZ8 1057 aaPredicted RBP32.34■■■□□ 2.77
USP42-202ENST00000404008 CATSPER4Q7RTX7 472 aa32.34■■■□□ 2.77
USP42-202ENST00000404008 TMX1Q9H3N1 280 aa32.34■■■□□ 2.77
USP42-202ENST00000404008 FZD8Q9H461 694 aa32.34■■■□□ 2.77
USP42-202ENST00000404008 OLFML3Q9NRN5 406 aa32.34■■■□□ 2.77
USP42-202ENST00000404008 RANBP2P49792 3224 aaKnown RBP32.34■■■□□ 2.77
USP42-202ENST00000404008 PHLPP2Q6ZVD8 1323 aa32.34■■■□□ 2.77
USP42-202ENST00000404008 KLRC4O43908 158 aa32.33■■■□□ 2.77
USP42-202ENST00000404008 AMHR2Q16671 573 aa32.33■■■□□ 2.77
USP42-202ENST00000404008 TMEM240Q5SV17 173 aa32.33■■■□□ 2.77
USP42-202ENST00000404008 ZNF365Q70YC5 407 aa32.33■■■□□ 2.77
USP42-202ENST00000404008 KCNN1Q92952 543 aa32.33■■■□□ 2.77
USP42-202ENST00000404008 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.33■■■□□ 2.77
USP42-202ENST00000404008 TMEM134Q9H6X4 195 aa32.33■■■□□ 2.77
USP42-202ENST00000404008 HOOK1Q9UJC3 728 aaKnown RBP32.33■■■□□ 2.77
USP42-202ENST00000404008 H0YCG3 227 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 FGBP02675 491 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 MAPTP10636 758 aaKnown RBP32.32■■■□□ 2.77
USP42-202ENST00000404008 EHHADHQ08426 723 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 PNOCQ13519 176 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 MAPK6Q16659 721 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 FAM187BQ17R55 369 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 PPP4R3CPQ6ZMV5 832 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 HAUS6Q7Z4H7 955 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 SLC17A8Q8NDX2 589 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 GPT2Q8TD30 523 aa32.32■■■□□ 2.77
USP42-202ENST00000404008 PRMT7Q9NVM4 692 aaPredicted RBP32.32■■■□□ 2.77
USP42-202ENST00000404008 DENND3A2RUS2 1198 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 K7ENM7 598 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 K7ERI5 159 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 ERLIN2O94905 339 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 SCP2P22307 547 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 NMT1P30419 496 aaKnown RBP32.32■■■□□ 2.76
USP42-202ENST00000404008 FAM43BQ6ZT52 329 aaPredicted RBP32.32■■■□□ 2.76
USP42-202ENST00000404008 TAS1R3Q7RTX0 852 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 PRIMPOLQ96LW4 560 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 FTHL17Q9BXU8 183 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 ST6GALNAC4Q9H4F1 302 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 MRPL44Q9H9J2 332 aaKnown RBP32.32■■■□□ 2.76
USP42-202ENST00000404008 AGPAT5Q9NUQ2 364 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 TBC1D7Q9P0N9 293 aa32.32■■■□□ 2.76
USP42-202ENST00000404008 TSPAN1O60635 241 aa32.31■■■□□ 2.76
USP42-202ENST00000404008 RPN1P04843 607 aaKnown RBP32.31■■■□□ 2.76
USP42-202ENST00000404008 PRKCBP05771 671 aa32.31■■■□□ 2.76
USP42-202ENST00000404008 ACTN1P12814 892 aa32.31■■■□□ 2.76
USP42-202ENST00000404008 IKBKEQ14164 716 aa32.31■■■□□ 2.76
USP42-202ENST00000404008 OTOP2Q7RTS6 562 aa32.31■■■□□ 2.76
USP42-202ENST00000404008 UBE2OQ9C0C9 1292 aaKnown RBP32.31■■■□□ 2.76
USP42-202ENST00000404008 BAIAP3O94812 1187 aa32.3■■■□□ 2.76
USP42-202ENST00000404008 ZNF720Q7Z2F6 126 aa32.3■■■□□ 2.76
USP42-202ENST00000404008 HPS3Q969F9 1004 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms