RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MINDY3Q9H8M7 445 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 XPNPEP1Q9NQW7 623 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 AGPAT5Q9NUQ2 364 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 FAM105AQ9NUU6 356 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 PUF60Q9UHX1 559 aaKnown RBP14.82□□□□□ -0.04
SDF4-203ENST00000403997 U2AF2P26368 475 aaKnown RBP eCLIP14.81□□□□□ -0.04
SDF4-203ENST00000403997 KRT17Q04695 432 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 TFDP1Q14186 410 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 NBR1Q14596 966 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 CTC1Q2NKJ3 1217 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 PUS10Q3MIT2 529 aaKnown RBP14.81□□□□□ -0.04
SDF4-203ENST00000403997 MCTP1Q6DN14 999 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 ADGRD2Q7Z7M1 963 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 RBM23Q86U06 439 aaKnown RBP14.81□□□□□ -0.04
SDF4-203ENST00000403997 ERMNQ8TAM6 284 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 LPPQ93052 612 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 NACC1Q96RE7 527 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 POLR3CQ9BUI4 534 aaPredicted RBP14.81□□□□□ -0.04
SDF4-203ENST00000403997 TLR9Q9NR96 1032 aa14.81□□□□□ -0.04
SDF4-203ENST00000403997 GRXCR2A6NFK2 248 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 INO80B-WBP1J3KQ70 363 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 USO1O60763 962 aaKnown RBP14.8□□□□□ -0.04
SDF4-203ENST00000403997 ZNF623O75123 536 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 MED24O75448 989 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 ERLIN2O94905 339 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 CD2BP2O95400 341 aaKnown RBP14.8□□□□□ -0.04
SDF4-203ENST00000403997 ARL2P36404 184 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 LTBRP36941 435 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 PBX3P40426 434 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 NRIP1P48552 1158 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 MCM2P49736 904 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 RAB27AP51159 221 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 PTENP60484 403 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 ERVFC1P60507 584 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 ADAM15Q13444 863 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 GLB1LQ6UWU2 654 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 MAEAQ7L5Y9 396 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 ASAP3Q8TDY4 903 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 MRPS27Q92552 414 aaKnown RBP14.8□□□□□ -0.04
SDF4-203ENST00000403997 PGBD4Q96DM1 585 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 MRPL9Q9BYD2 267 aaKnown RBP14.8□□□□□ -0.04
SDF4-203ENST00000403997 TLE6Q9H808 572 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 SPG21Q9NZD8 308 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 LZTS1Q9Y250 596 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 INPP5FQ9Y2H2 1132 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 PCDHB2Q9Y5E7 798 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 PCDHGC5Q9Y5F6 944 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 KIAA1671Q9BY89 1806 aa14.8□□□□□ -0.04
SDF4-203ENST00000403997 LINC01565O15544 149 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 OFD1O75665 1012 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 IL9P15248 144 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 RPA1P27694 616 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 HOXD11P31277 338 aaPredicted RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 PPM1AP35813 382 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 ALDH7A1P49419 539 aaKnown RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 TOB1P50616 345 aaPredicted RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 PLCB3Q01970 1234 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 POU5F1BQ06416 359 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 DLX2Q07687 328 aaPredicted RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 NCBP1Q09161 790 aaKnown RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 PTGDRQ13258 359 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 CLUL1Q15846 466 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 NOMO2Q5JPE7 1267 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 PDE12Q6L8Q7 609 aaKnown RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 POTEGQ6S5H5 508 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 C4orf32Q8N8J7 132 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 TBC1D32Q96NH3 1257 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 DBR1Q9UK59 544 aaKnown RBP14.79□□□□□ -0.04
SDF4-203ENST00000403997 FAM50BQ9Y247 325 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 PCDHB6Q9Y5E3 794 aa14.79□□□□□ -0.04
SDF4-203ENST00000403997 MEIS3P2A8K0S8 358 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 NT5C1B-RDH14C9J2C7 533 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 H3BQV1 296 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 PER2O15055 1255 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 GLRA2P23416 452 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 GJB2P29033 226 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 CCT6AP40227 531 aaKnown RBP14.78□□□□□ -0.04
SDF4-203ENST00000403997 NDUFV1P49821 464 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
SDF4-203ENST00000403997 BCAR1P56945 870 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 RNASELQ05823 741 aaKnown RBP14.78□□□□□ -0.04
SDF4-203ENST00000403997 CAPSQ13938 189 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 PLPP4Q5VZY2 271 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 HAUS3Q68CZ6 603 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 FAM178BQ8IXR5 827 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 EFHBQ8N7U6 833 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 RSPH1Q8WYR4 309 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 GPRC5CQ9NQ84 441 aa14.78□□□□□ -0.04
SDF4-203ENST00000403997 ARHGEF35A5YM69 484 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 FSCN2O14926 492 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 TSPAN1O60635 241 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 ZC3H11AO75152 810 aaKnown RBP eCLIP14.77□□□□□ -0.052e-6■□□□□ 8.9
SDF4-203ENST00000403997 TBX10O75333 385 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 AXLP30530 894 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 PDIA5Q14554 519 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 PCBP1Q15365 356 aaKnown RBP eCLIP14.77□□□□□ -0.05
SDF4-203ENST00000403997 UBXN11Q5T124 520 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 PADI6Q6TGC4 694 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms