RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 GADD45BO75293 160 aaPredicted RBP18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 FAM13AO94988 1023 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 AMHP03971 560 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 LIG1P18858 919 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 IBSPP21815 317 aaPredicted RBP18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 SYKP43405 635 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 DMP1Q13316 513 aaPredicted RBP18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CSPP1Q1MSJ5 1256 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 ZBTB8OSQ8IWT0 167 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 MYCT1Q8N699 235 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 DNAJC19Q96DA6 116 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 C2orf40Q9H1Z8 148 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 TNMDQ9H2S6 317 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 C17orf75Q9HAS0 396 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 KMT5AQ9NQR1 393 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 RGS18Q9NS28 235 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 EVPLQ92817 2033 aa18.98■□□□□ 0.63
PTCHD3P3-201ENST00000403073 SLC16A4O15374 487 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 B4GALT5O43286 388 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 ACTN4O43707 911 aaKnown RBP18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 TBCAO75347 108 aaKnown RBP18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 SLFN14P0C7P3 912 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 ATP2A2P16615 1042 aaKnown RBP18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 ZSCAN20P17040 1043 aaPredicted RBP18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 AFMP43652 599 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 ZNF131P52739 623 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 GRAMD1CQ8IYS0 662 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CEP57L1Q8IYX8 460 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 MYOCDQ8IZQ8 938 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 PHOSPHO2Q8TCD6 241 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 NTPCRQ9BSD7 190 aaKnown RBP18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 LRRC27Q9C0I9 530 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 FZD8Q9H461 694 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 PARVGQ9HBI0 331 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 PIN4Q9Y237 131 aaKnown RBP18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 USP20Q9Y2K6 914 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CEP290O15078 2479 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 SIP14410 1827 aa18.97■□□□□ 0.63
PTCHD3P3-201ENST00000403073 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 TSPAN1O60635 241 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 ERLIN2O94905 339 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 UPP2O95045 317 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 IDEP14735 1019 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CASP1P29466 404 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 HOXA11P31270 313 aaPredicted RBP18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 RABGGTBP53611 331 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 AMPD3Q01432 767 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 AMHR2Q16671 573 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 SPIRE2Q8WWL2 714 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 PAGE5Q96GU1 130 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CPB2Q96IY4 423 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 SLC9A7Q96T83 725 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CCDC113Q9H0I3 377 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 BLZF1Q9H2G9 400 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 CHST12Q9NRB3 414 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 AGPAT5Q9NUQ2 364 aa18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 LARSQ9P2J5 1176 aaKnown RBP18.96■□□□□ 0.63
PTCHD3P3-201ENST00000403073 TTLL13PA6NNM8 815 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 K7ERI5 159 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 PRPF40AO75400 957 aaKnown RBP18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 ZNF202O95125 648 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 EFNA5P52803 228 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 SMTNP53814 917 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 MAPK6Q16659 721 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 LRIT3Q3SXY7 679 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 HABP4Q5JVS0 413 aaKnown RBP18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 SLC24A5Q71RS6 500 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 HERC6Q8IVU3 1022 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TMEM87AQ8NBN3 555 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TMEM161BQ8NDZ6 487 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TOP1MTQ969P6 601 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 C7orf25Q9BPX7 421 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TRIM9Q9C026 710 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 MAGEF1Q9HAY2 307 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 PRMT7Q9NVM4 692 aaPredicted RBP18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 ARHGAP28Q9P2N2 729 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 USP25Q9UHP3 1055 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 KCNG1Q9UIX4 513 aa18.95■□□□□ 0.62
PTCHD3P3-201ENST00000403073 C9IYK1 514 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TRAK2O60296 914 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 EDN1P05305 212 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 PRKCBP05771 671 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 ARF4P18085 180 aaPredicted RBP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 FAM189BP81408 668 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 NCBP1Q09161 790 aaKnown RBP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 CUL4BQ13620 913 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 PCBP1Q15365 356 aaKnown RBP eCLIP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TWF2Q6IBS0 349 aaKnown RBP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 CLEC17AQ6ZS10 378 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 FAM43BQ6ZT52 329 aaPredicted RBP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 TAS1R3Q7RTX0 852 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 CDR2LQ86X02 465 aaPredicted RBP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 SFR1Q86XK3 245 aa18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 FMR1NBQ8N0W7 255 aaPredicted RBP18.94■□□□□ 0.62
PTCHD3P3-201ENST00000403073 ZBED2Q9BTP6 218 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms