RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FOXK2Q01167 660 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
VAMP1-203ENST00000400911 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 XKR3Q5GH77 459 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 CWF19L1Q69YN2 538 aaKnown RBP16.38■□□□□ 0.21
VAMP1-203ENST00000400911 GPR149Q86SP6 731 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 PPFIBP1Q86W92 1011 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 ZNF280BQ86YH2 543 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 RHPN2Q8IUC4 686 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 BRF1Q92994 677 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 NKD2Q969F2 451 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-203ENST00000400911 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-203ENST00000400911 FAM105AQ9NUU6 356 aa16.38■□□□□ 0.21
VAMP1-203ENST00000400911 LOXHD1Q8IVV2 1947 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 CARNS1A5YM72 827 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 B4GALT3O60512 393 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 ZNF623O75123 536 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 PSMD10O75832 226 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
VAMP1-203ENST00000400911 NPR3P17342 541 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 KLRC2P26717 231 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 CLCN4P51793 760 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 TDGQ13569 410 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 OTOP3Q7RTS5 596 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 CATSPER4Q7RTX7 472 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 RSPH1Q8WYR4 309 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 KLHL5Q96PQ7 755 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 EMILIN2Q9BXX0 1053 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 INO80BQ9C086 356 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-203ENST00000400911 SFXN1Q9H9B4 322 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 VPS54Q9P1Q0 977 aa16.37■□□□□ 0.21
VAMP1-203ENST00000400911 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 CNPP09543 421 aaKnown RBP16.36■□□□□ 0.21
VAMP1-203ENST00000400911 NTRK3Q16288 839 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 CCDC149Q6ZUS6 474 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 ZNF410Q86VK4 478 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 KCNK12Q9HB15 430 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 PCDHB2Q9Y5E7 798 aa16.36■□□□□ 0.21
VAMP1-203ENST00000400911 LILRB3O75022 631 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 MAFO75444 373 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-203ENST00000400911 DDHD2O94830 711 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 ALDH2P05091 517 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 AOC1P19801 751 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 RAB27AP51159 221 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 AFF1P51825 1210 aaKnown RBP16.35■□□□□ 0.21
VAMP1-203ENST00000400911 Q4G0T1 1027 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 AGMOQ6ZNB7 445 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 SIX5Q8N196 739 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 TBCKQ8TEA7 893 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 PGBD4Q96DM1 585 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 IFT122Q9HBG6 1241 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 FBXL21Q9UKT6 434 aa16.35■□□□□ 0.21
VAMP1-203ENST00000400911 TDP2O95551 362 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 NLRP5P59047 1200 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 B3GNT9Q6UX72 402 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 ANO5Q75V66 913 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 CCDC105Q8IYK2 499 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 URGCPQ8TCY9 931 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 JAKMIP1Q96N16 626 aaKnown RBP16.34■□□□□ 0.21
VAMP1-203ENST00000400911 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
VAMP1-203ENST00000400911 MRPL17Q9NRX2 175 aaKnown RBP16.34■□□□□ 0.21
VAMP1-203ENST00000400911 DUSP12Q9UNI6 340 aa16.34■□□□□ 0.21
VAMP1-203ENST00000400911 CYP3A7-CYP3A51PA0A087WV96 503 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 C2CD2LO14523 706 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 NARSO43776 548 aaKnown RBP16.33■□□□□ 0.2
VAMP1-203ENST00000400911 CYP3A7P24462 503 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 ANGPT1Q15389 498 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 PLA2G4FQ68DD2 849 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 DTWD2Q8NBA8 298 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 FAM193BQ96PV7 902 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-203ENST00000400911 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
VAMP1-203ENST00000400911 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 STK39Q9UEW8 545 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 NID2Q14112 1375 aa16.33■□□□□ 0.2
VAMP1-203ENST00000400911 STK25O00506 426 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 NRP1O14786 923 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 N4BP1O75113 896 aaKnown RBP16.32■□□□□ 0.2
VAMP1-203ENST00000400911 POMCP01189 267 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 MYBP10242 640 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 IFNAR1P17181 557 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 PTPRZ1P23471 2315 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-203ENST00000400911 AK2P54819 239 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 PSMC5P62195 406 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
VAMP1-203ENST00000400911 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 C15orf39Q6ZRI6 1047 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
VAMP1-203ENST00000400911 MRPL10Q7Z7H8 261 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms