RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 FAM105AQ9NUU6 356 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
ATG4B-203ENST00000400772 PCDHB6Q9Y5E3 794 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 PCDHGC5Q9Y5F6 944 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 PLXNA4Q9HCM2 1894 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 NCK2O43639 380 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 GLRA2P23416 452 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 RPA1P27694 616 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 GJB2P29033 226 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 PBX3P40426 434 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 PLCB3Q01970 1234 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 DLX2Q07687 328 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-203ENST00000400772 MXD4Q14582 209 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-203ENST00000400772 ECM1Q16610 540 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 LONRF3Q496Y0 759 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 UBXN11Q5T124 520 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 THNSL1Q8IYQ7 743 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 ABI1Q8IZP0 508 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 LRRC43Q8N309 656 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 IGFLR1Q9H665 355 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 CLDND1Q9NY35 253 aa17.65■□□□□ 0.42
ATG4B-203ENST00000400772 FSCN2O14926 492 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 SKIP12755 728 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 MCM2P49736 904 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
ATG4B-203ENST00000400772 ERVFC1P60507 584 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 UBE3AQ05086 875 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 POU5F1BQ06416 359 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 PTGDRQ13258 359 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 CAPSQ13938 189 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 CSPP1Q1MSJ5 1256 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 POTEGQ6S5H5 508 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 KCNT2Q6UVM3 1135 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 IFNLR1Q8IU57 520 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-203ENST00000400772 NACC1Q96RE7 527 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 DBR1Q9UK59 544 aaKnown RBP17.64■□□□□ 0.41
ATG4B-203ENST00000400772 PCDHB2Q9Y5E7 798 aa17.64■□□□□ 0.41
ATG4B-203ENST00000400772 GRXCR2A6NFK2 248 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 LINC01565O15544 149 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 TSPAN1O60635 241 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 USO1O60763 962 aaKnown RBP17.63■□□□□ 0.41
ATG4B-203ENST00000400772 OFD1O75665 1012 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 IL9P15248 144 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 RAB27AP51159 221 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 ADAM15Q13444 863 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 IL17AQ16552 155 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 PTCRAQ6ISU1 281 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-203ENST00000400772 AGMOQ6ZNB7 445 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 EP400NLQ6ZTU2 488 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 MRPL10Q7Z7H8 261 aaKnown RBP17.63■□□□□ 0.41
ATG4B-203ENST00000400772 ERMNQ8TAM6 284 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 POLR3FQ9H1D9 316 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-203ENST00000400772 GPRC5CQ9NQ84 441 aa17.63■□□□□ 0.41
ATG4B-203ENST00000400772 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.63■□□□□ 0.41
ATG4B-203ENST00000400772 MBTD1Q05BQ5 628 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 TFDP1Q14186 410 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 PDIA5Q14554 519 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 AMHR2Q16671 573 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 SLC39A11Q8N1S5 342 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 IGSF22Q8N9C0 903 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 MRPS27Q92552 414 aaKnown RBP17.62■□□□□ 0.41
ATG4B-203ENST00000400772 CCDC43Q96MW1 224 aaKnown RBP17.62■□□□□ 0.41
ATG4B-203ENST00000400772 ZNF558Q96NG5 402 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 MRPL9Q9BYD2 267 aaKnown RBP17.62■□□□□ 0.41
ATG4B-203ENST00000400772 NFKBIZQ9BYH8 718 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 TLR9Q9NR96 1032 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 LRWD1Q9UFC0 647 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 LZTS1Q9Y250 596 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 KIF3AQ9Y496 699 aa17.62■□□□□ 0.41
ATG4B-203ENST00000400772 TBX10O75333 385 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 MUTP22033 750 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 NRIP1P48552 1158 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 AFF1P51825 1210 aaKnown RBP17.61■□□□□ 0.41
ATG4B-203ENST00000400772 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.41
ATG4B-203ENST00000400772 PUS10Q3MIT2 529 aaKnown RBP17.61■□□□□ 0.41
ATG4B-203ENST00000400772 MCTP1Q6DN14 999 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 PADI6Q6TGC4 694 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 RBM23Q86U06 439 aaKnown RBP17.61■□□□□ 0.41
ATG4B-203ENST00000400772 SMG8Q8ND04 991 aaKnown RBP17.61■□□□□ 0.41
ATG4B-203ENST00000400772 MICAL1Q8TDZ2 1067 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 CPB2Q96IY4 423 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 EIF2AQ9BY44 585 aaKnown RBP17.61■□□□□ 0.41
ATG4B-203ENST00000400772 NRDE2Q9H7Z3 1164 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 CD320Q9NPF0 282 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 TBC1D13Q9NVG8 400 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 SPG21Q9NZD8 308 aa17.61■□□□□ 0.41
ATG4B-203ENST00000400772 NT5C1B-RDH14C9J2C7 533 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 INO80B-WBP1J3KQ70 363 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 PER2O15055 1255 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 B4GALT3O60512 393 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 ERLIN2O94905 339 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 NCLP19338 710 aaKnown RBP17.6■□□□□ 0.41
ATG4B-203ENST00000400772 AXLP30530 894 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 CCT6AP40227 531 aaKnown RBP17.6■□□□□ 0.41
ATG4B-203ENST00000400772 BCAR1P56945 870 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 NOMO2Q5JPE7 1267 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 GLB1LQ6UWU2 654 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 FAM178BQ8IXR5 827 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 EFHBQ8N7U6 833 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms