RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 YWHABP31946 246 aaKnown RBP19.43■□□□□ 0.7
COL18A1-204ENST00000400337 KPNA2P52292 529 aaKnown RBP19.43■□□□□ 0.7
COL18A1-204ENST00000400337 ARL4CP56559 192 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 DMTNQ08495 405 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 TUFT1Q9NNX1 390 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 GOLGA8QA0A0J9YX86 632 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 GOLGA8OA6NCC3 632 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 GOLGA8NF8WBI6 632 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 EPHB1P54762 984 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 NUGGCQ68CJ6 796 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 EPC1Q9H2F5 836 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 TTC7AQ9ULT0 858 aaPredicted RBP19.43■□□□□ 0.7
COL18A1-204ENST00000400337 ZNRF3Q9ULT6 936 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 PDXKO00764 312 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 NAA30Q147X3 362 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 UBN1Q9NPG3 1134 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 AGO2Q9UKV8 859 aaKnown RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 G3BP2Q9UN86 482 aaKnown RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 KIF3CO14782 793 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 RASA1P20936 1047 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 TTC13Q8NBP0 860 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 GOLGA8MH3BSY2 632 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 DPYDQ12882 1025 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 USP49Q70CQ1 688 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 Q9H521 79 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 JCADQ9P266 1359 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 FDPSP14324 419 aaKnown RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 ELF1P32519 619 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 SOX5P35711 763 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 PSMC1P62191 440 aaKnown RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 C16orf86Q6ZW13 317 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 PDCD7Q8N8D1 485 aaKnown RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 GBP7Q8N8V2 638 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 FBXL13Q8NEE6 735 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 LIMA1Q9UHB6 759 aaKnown RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 SLC12A1Q13621 1099 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 FBXO33Q7Z6M2 555 aa19.42■□□□□ 0.7
COL18A1-204ENST00000400337 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.42■□□□□ 0.73e-7■■■■■ 42.8
COL18A1-204ENST00000400337 JPH1Q9HDC5 661 aaPredicted RBP19.42■□□□□ 0.7
COL18A1-204ENST00000400337 PDCLQ13371 301 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 LMBRD2Q68DH5 695 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 ADSSL1Q8N142 457 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.41■□□□□ 0.76e-15■■□□□ 13.9
COL18A1-204ENST00000400337 KLHL8Q9P2G9 620 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 CERKQ8TCT0 537 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 PRPF31Q8WWY3 499 aaKnown RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 TTC1Q99614 292 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 BNIP3LO60238 219 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 ATP1A1P05023 1023 aaKnown RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 SDC4P31431 198 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 THEM5Q8N1Q8 247 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 CALR3Q96L12 384 aaKnown RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 FAM217BQ9NTX9 383 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-204ENST00000400337 KRT37O76014 449 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 NYAP2Q9P242 653 aa19.41■□□□□ 0.7
COL18A1-204ENST00000400337 PDHBP11177 359 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 PMLP29590 882 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 GGCXP38435 758 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 SCN4BQ8IWT1 228 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 MICALL2Q8IY33 904 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 MAML1Q92585 1016 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 NCAPGQ9BPX3 1015 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
COL18A1-204ENST00000400337 TTC4O95801 387 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 USH1CQ9Y6N9 552 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 STXBP3O00186 592 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 SDCCAG3Q96C92 435 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 A0A1B0GTH6 734 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 WDR24Q96S15 920 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 CD163L1Q9NR16 1453 aa19.4■□□□□ 0.7
COL18A1-204ENST00000400337 CTDNEP1O95476 244 aa19.39■□□□□ 0.7
COL18A1-204ENST00000400337 SSTR3P32745 418 aaPredicted RBP19.39■□□□□ 0.7
COL18A1-204ENST00000400337 HHIPL2Q6UWX4 724 aa19.39■□□□□ 0.7
COL18A1-204ENST00000400337 C7orf25Q9BPX7 421 aa19.39■□□□□ 0.7
COL18A1-204ENST00000400337 VGLL3A8MV65 326 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 RASA4BC9J798 803 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 RASA4O43374 803 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 MMEP08473 750 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 STK4Q13043 487 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 ZNF449Q6P9G9 518 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 RFFLQ8WZ73 363 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 TTC17Q96AE7 1141 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 PRKAG2Q9UGJ0 569 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 CEMIPQ8WUJ3 1361 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 TTC36A6NLP5 189 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 NCF2P19878 526 aaPredicted RBP19.39■□□□□ 0.69
COL18A1-204ENST00000400337 BAATQ14032 418 aaPredicted RBP19.39■□□□□ 0.69
COL18A1-204ENST00000400337 COG2Q14746 738 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 ENOSF1Q7L5Y1 443 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 CHP1Q99653 195 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 ELAC2Q9BQ52 826 aaKnown RBP19.39■□□□□ 0.69
COL18A1-204ENST00000400337 TXLNGQ9NUQ3 528 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 CIITAP33076 1130 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 RNF149Q8NC42 400 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 THOC1Q96FV9 657 aaKnown RBP19.39■□□□□ 0.69
COL18A1-204ENST00000400337 REEP2Q9BRK0 252 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 EDEM3Q9BZQ6 932 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 IP6K2Q9UHH9 426 aa19.39■□□□□ 0.69
COL18A1-204ENST00000400337 LCMT1Q9UIC8 334 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms