RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZBTB18Q99592 522 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 TMEM47Q9BQJ4 181 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 DYRK4Q9NR20 520 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 PTPRTO14522 1441 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 TTLL4Q14679 1199 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 C1orf54Q8WWF1 131 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 CUEDC2Q9H467 287 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 TTI1O43156 1089 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 TRIM49P0CI25 452 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 TRIM49CP0CI26 452 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 PCSK7Q16549 785 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 BTN2A2Q8WVV5 523 aa14.66□□□□□ -0.06
VAPA-202ENST00000400000 SEC24DO94855 1032 aaPredicted RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 GABPB1Q06547 395 aaPredicted RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 NUDCD3Q8IVD9 361 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 FAM118BQ9BPY3 351 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 CYP2E1P05181 493 aaPredicted RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 GPS1Q13098 491 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 FAM102AQ5T9C2 384 aaPredicted RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 CC2D1AQ6P1N0 951 aaPredicted RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 MICALL2Q8IY33 904 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 PDIK1LQ8N165 341 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 DHX38Q92620 1227 aaKnown RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 ABCB6Q9NP58 842 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 ZC3H4Q9UPT8 1303 aaKnown RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 ESYT3A0FGR9 886 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 NR3C1P04150 777 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 SRRM1Q8IYB3 904 aaKnown RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 ABHD8Q96I13 439 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 THAP9Q9H5L6 903 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 CD209Q9NNX6 404 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 STRIP2Q9ULQ0 834 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 SYCE1LA8MT33 242 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 GRAP2O75791 330 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 PDHA1P08559 390 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 EPC1Q9H2F5 836 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 GOLGA8QA0A0J9YX86 632 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 GOLGA8OA6NCC3 632 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 RASA4BC9J798 803 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 GOLGA8NF8WBI6 632 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 RASA4O43374 803 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 PRCPP42785 496 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 KPNA2P52292 529 aaKnown RBP14.65□□□□□ -0.06
VAPA-202ENST00000400000 DACH2Q96NX9 599 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 RAD18Q9NS91 495 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 SUN2Q9UH99 717 aa14.65□□□□□ -0.06
VAPA-202ENST00000400000 LRRC53A6NM62 1247 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 ZBTB5O15062 677 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 TADA3O75528 432 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 PCP11498 1178 aaKnown RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 PPARGP37231 505 aaPredicted RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 PAPOLAP51003 745 aaKnown RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 COASYQ13057 564 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 EPHA10Q5JZY3 1008 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 SLFN12LQ6IEE8 588 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 CCDC124Q96CT7 223 aaKnown RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 PBKQ96KB5 322 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 SEPT5Q99719 369 aaPredicted RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 WARS2Q9UGM6 360 aaKnown RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 FASTKD1Q53R41 847 aaKnown RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 BEND6Q5SZJ8 279 aaPredicted RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 BRINP3Q76B58 766 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 MAGEF1Q9HAY2 307 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 RARBP10826 455 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 PPP3CCP48454 512 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 COPS2P61201 443 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 FLOT2Q14254 428 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 HDAC6Q9UBN7 1215 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 FEM1BQ9UK73 627 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 DOLKQ9UPQ8 538 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 CCNE1P24864 410 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 PRAMEP78395 509 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 LRRC74AQ0VAA2 488 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 SLC30A5Q8TAD4 765 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 FBXO41Q8TF61 875 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 EFHD1Q9BUP0 239 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 TDP2O95551 362 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 TAF1CQ15572 869 aaPredicted RBP14.64□□□□□ -0.07
VAPA-202ENST00000400000 TMC4Q7Z404 712 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 PLEKHF1Q96S99 279 aa14.64□□□□□ -0.07
VAPA-202ENST00000400000 KCNJ6P48051 423 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 CENPAP49450 140 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 VAMP7P51809 220 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 TRIM42Q8IWZ5 723 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 STAG2Q8N3U4 1231 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 MRFAP1L1Q96HT8 127 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 LXNQ9BS40 222 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ASNSD1Q9NWL6 643 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ADAMTS12P58397 1594 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 SENP1Q9P0U3 644 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 PLXNC1O60486 1568 aa14.63□□□□□ -0.07
VAPA-202ENST00000400000 DYNC1LI2O43237 492 aaPredicted RBP14.63□□□□□ -0.07
VAPA-202ENST00000400000 ESRRGP62508 458 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms