RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 RFX7Q2KHR2 1363 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 XPOTO43592 962 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 CLASP2O75122 1294 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 SPAG6O75602 509 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 KITP10721 976 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 CDC27P30260 824 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 HSPA2P54652 639 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 DARS2Q6PI48 645 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 C11orf74Q86VG3 221 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 PLD3Q8IV08 490 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 MSL3Q8N5Y2 521 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 ZNF304Q9HCX3 659 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 HPCAL4Q9UM19 191 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 GMEB1Q9Y692 573 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 MROH5Q6ZUA9 1318 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 M0R2C6 588 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 MED7O43513 233 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 ZMYND10O75800 440 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 NFKBIAP25963 317 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 PDIA3P30101 505 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 COPS2P61201 443 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 GOLGA8FQ08AF8 430 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 RIPPLY1Q0D2K3 151 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 PASD1Q8IV76 773 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 RSPH1Q8WYR4 309 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 CYP26B1Q9NR63 512 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 UBAP1Q9NZ09 502 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 KDM5AP29375 1690 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 M0R3G1 203 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 LRRC74AQ0VAA2 488 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 SCRN1Q12765 414 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 DMP1Q13316 513 aaPredicted RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 CYTH1Q15438 398 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 YTHDF3Q7Z739 585 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 ST13P5Q8NFI4 369 aaPredicted RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 PRPF18Q99633 342 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 CD209Q9NNX6 404 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 NPATQ14207 1427 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 ZNF233A6NK53 670 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 AP3B1O00203 1094 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 ARL4DP49703 201 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.993e-6■■■■■ 32.1
CHD8-201ENST00000399982 RWDD4Q6NW29 188 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 ZNF507Q8TCN5 953 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 USP33Q8TEY7 942 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 JADE3Q92613 823 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 LARP4BQ92615 738 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 FAM227BQ96M60 508 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 AGBL1Q96MI9 1066 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 XPO6Q96QU8 1125 aaKnown RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 OLFM1Q99784 485 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 SH3GL1Q99961 368 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 NDST4Q9H3R1 872 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 K7ENM7 598 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 FGGP02679 453 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 ATP2B4P23634 1241 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 TTKP33981 857 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 POLGP54098 1239 aaPredicted RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 CNGA2Q16280 664 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 ELMSAN1Q6PJG2 1045 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 CCDC149Q6ZUS6 474 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 NCAPG2Q86XI2 1143 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 RNF139Q8WU17 664 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 OLFML3Q9NRN5 406 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 H2AFY2Q9P0M6 372 aaPredicted RBP8.88□□□□□ -0.99
CHD8-201ENST00000399982 BTBD7Q9P203 1132 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 LRCH1Q9Y2L9 728 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
CHD8-201ENST00000399982 PI4K2BG5E9Z4 385 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 XPO1O14980 1071 aaKnown RBP8.87□□□□□ -0.99
CHD8-201ENST00000399982 MESDQ14696 234 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 PLBD2Q8NHP8 589 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 GTSE1Q9NYZ3 720 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 RPAP1Q9BWH6 1393 aaPredicted RBP8.87□□□□□ -0.99
CHD8-201ENST00000399982 CDK13Q14004 1512 aaKnown RBP8.87□□□□□ -0.99
CHD8-201ENST00000399982 MAP3K13O43283 966 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 SEC24DO94855 1032 aaPredicted RBP8.87□□□□□ -0.99
CHD8-201ENST00000399982 KRT6AP02538 564 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 KRT6BP04259 564 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 KRT6CP48668 564 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 RESTQ13127 1097 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 TBC1D9BQ66K14 1250 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 FAM178BQ8IXR5 827 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 EXOC8Q8IYI6 725 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 SNF8Q96H20 258 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 WNT8AQ9H1J5 351 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 SEL1LQ9UBV2 794 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 POTEFA5A3E0 1075 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 HSD3B2P26439 372 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 SERPINB8P50452 374 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 CCDC157Q569K6 752 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 RESP18Q5W5W9 173 aa8.87□□□□□ -0.99
CHD8-201ENST00000399982 OLFML2BQ68BL8 750 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms