RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 PTK7Q13308 1070 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 SNX17Q15036 470 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 MTFR1Q15390 333 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 CXCL17Q6UXB2 119 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 SRGAP1Q7Z6B7 1085 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 MTERF4Q7Z6M4 381 aaKnown RBP7.54□□□□□ -1.2
USP16-203ENST00000399975 SERINC5Q86VE9 423 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 PRPF31Q8WWY3 499 aaKnown RBP7.54□□□□□ -1.2
USP16-203ENST00000399975 TMEM143Q96AN5 459 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 TRIM44Q96DX7 344 aaPredicted RBP7.54□□□□□ -1.2
USP16-203ENST00000399975 CEP63Q96MT8 703 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 THAP9Q9H5L6 903 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 SETD4Q9NVD3 440 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 TBX20Q9UMR3 447 aa7.54□□□□□ -1.2
USP16-203ENST00000399975 KIAA0391O15091 583 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 MAPK13O15264 365 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 CALUO43852 315 aaPredicted RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 GPR32O75388 356 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 COL6A1P12109 1028 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 NMT1P30419 496 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 RAD51AP2Q09MP3 1159 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ITGA7Q13683 1181 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 TAS1R3Q7RTX0 852 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 TRAPPC12Q8WVT3 735 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 GLT1D1Q96MS3 346 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 CTAGE1Q96RT6 745 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 TSG101Q99816 390 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 DUSP9Q99956 384 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 HSD3B7Q9H2F3 369 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 FZD8Q9H461 694 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 DMAC2Q9NW81 257 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 SQORQ9Y6N5 450 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 TRIP12Q14669 1992 aaPredicted RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 TANC1Q9C0D5 1861 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ADGRA3Q8IWK6 1321 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 SFI1A8K8P3 1242 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 K7ENM7 598 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ARVCFO00192 962 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 GCNT3O95395 438 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 FGFR1OPO95684 399 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 ZNF18P17022 549 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 GPC3P51654 580 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 POU5F1Q01860 360 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 DRP2Q13474 957 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 TRIM71Q2Q1W2 868 aaKnown RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 ISM2Q6H9L7 571 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 GDF6Q6KF10 455 aaPredicted RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 SMYD4Q8IYR2 804 aaPredicted RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 HPS3Q969F9 1004 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 PRIMPOLQ96LW4 560 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 NAP1L5Q96NT1 182 aaPredicted RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 SH2D3AQ9BRG2 576 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 RNF208Q9H0X6 261 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 CTNND2Q9UQB3 1225 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.53□□□□□ -1.2
USP16-203ENST00000399975 SLC16A4O15374 487 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 TGFB1I1O43294 461 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 CYP2C9P11712 490 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 PHKA2P46019 1235 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 SOX10P56693 466 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 MGAT3Q09327 533 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ANKRD40Q6AI12 368 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 SARM1Q6SZW1 724 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 FILIP1Q7Z7B0 1213 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ZBTB8OSQ8IWT0 167 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 GLIS3Q8NEA6 775 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 DEPTORQ8TB45 409 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 DEFB118Q96PH6 123 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 ZHX3Q9H4I2 956 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 IFT122Q9HBG6 1241 aa7.53□□□□□ -1.2
USP16-203ENST00000399975 MROH7Q68CQ1 1323 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 RALGAPA2Q2PPJ7 1873 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 SLC16A3O15427 465 aaKnown RBP7.52□□□□□ -1.21
USP16-203ENST00000399975 TREHO43280 583 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 GNA14O95837 355 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 CD4P01730 458 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 GARTP22102 1010 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 CLCN3P51790 818 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 CRYBB1P53674 252 aaPredicted RBP7.52□□□□□ -1.21
USP16-203ENST00000399975 MBTD1Q05BQ5 628 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 LRRC55Q6ZSA7 311 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 LRRC71Q8N4P6 559 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 U2AF1L4Q8WU68 220 aaKnown RBP7.52□□□□□ -1.21
USP16-203ENST00000399975 MKNK1Q9BUB5 465 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 DENND3A2RUS2 1198 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 CCDC169A6NNP5 214 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 PRPF6O94906 941 aaKnown RBP7.52□□□□□ -1.21
USP16-203ENST00000399975 PROZP22891 400 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 AXLP30530 894 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 PMS1P54277 932 aaKnown RBP7.52□□□□□ -1.21
USP16-203ENST00000399975 TPM4P67936 248 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 IGBP1P78318 339 aa7.52□□□□□ -1.21
USP16-203ENST00000399975 ZC2HC1CQ53FD0 456 aaPredicted RBP7.52□□□□□ -1.21
USP16-203ENST00000399975 MAEAQ7L5Y9 396 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms