RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ADCY6O43306 1168 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 BLOC1S5Q8TDH9 187 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TP53INP1Q96A56 240 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 S100PBPQ96BU1 408 aa9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 TSEN34Q9BSV6 310 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 RPH3AQ9Y2J0 694 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-220ENST00000399655 IZUMO1Q8IYV9 350 aa9.09□□□□□ -0.96
CACNA1C-220ENST00000399655 STOX2Q9P2F5 926 aaPredicted RBP9.09□□□□□ -0.96
CACNA1C-220ENST00000399655 COQ6Q9Y2Z9 468 aa9.09□□□□□ -0.96
CACNA1C-220ENST00000399655 ARHGEF33A8MVX0 844 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ATF4P18848 351 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 PARP9Q8IXQ6 854 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF513Q8N8E2 541 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ZC3H10Q96K80 434 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 CNDP1Q96KN2 507 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 MRPL1Q9BYD6 325 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ING4Q9UNL4 249 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 CACNA1FO60840 1977 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 SARM1Q6SZW1 724 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 PBKQ96KB5 322 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 PHACTR1Q9C0D0 580 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 PFDN2Q9UHV9 154 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 KNTC1P50748 2209 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 SYNDIG1LA6NDD5 238 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 COPEO14579 308 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 FOSP01100 380 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 RRM2P31350 389 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 SPATA1Q5VX52 437 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 METTL23Q86XA0 190 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 RFX6Q8HWS3 928 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 CHCHD6Q9BRQ6 235 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 XPO7Q9UIA9 1087 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 RTN3O95197 1032 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 RXRGP48443 463 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 AK2P54819 239 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 GTSE1Q9NYZ3 720 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 VTI1BQ9UEU0 232 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 SASH3O75995 380 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 TSNQ15631 228 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 DSTYKQ6XUX3 929 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 CYP4Z2PQ8N1L4 340 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 DSN1Q9H410 356 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 GPN3Q9UHW5 284 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ANXA13P27216 316 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 CBX5P45973 191 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 KLHL38Q2WGJ6 581 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 SYTL3Q4VX76 610 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 RELL1Q8IUW5 271 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 SLC10A4Q96EP9 437 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 FBXO28Q9NVF7 368 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 ARID1BQ8NFD5 2236 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 AP3B1O00203 1094 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 VWA5AO00534 786 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 RFC4P35249 363 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 KPNA1P52294 538 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 AKIRIN2Q53H80 203 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 OR8H2Q8N162 312 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 PGRMC1O00264 195 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 KCNA3P22001 575 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 STOMP27105 288 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 EDRF1Q3B7T1 1238 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 HIPK4Q8NE63 616 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 MAGED4Q96JG8 741 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 NRBP1Q9UHY1 535 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 KCNH3Q9ULD8 1083 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 DYRK3O43781 588 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 MPOP05164 745 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 TRPV3Q8NET8 790 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 GDPD2Q9HCC8 539 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 TTC7AQ9ULT0 858 aaPredicted RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 MAP1BP46821 2468 aaKnown RBP9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 KIF24Q5T7B8 1368 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 NPR3P17342 541 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 EXOC3L4Q17RC7 722 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 FAM172AQ8WUF8 416 aa9.08□□□□□ -0.96
CACNA1C-220ENST00000399655 H7C1W4 665 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 SAMSN1Q9NSI8 373 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 TMOD3Q9NYL9 352 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 XPR1Q9UBH6 696 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 SLC25A13Q9UJS0 675 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 VWA3AA6NCI4 1184 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 GNAT3A8MTJ3 354 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 KPNA5O15131 536 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RPS2P15880 293 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 POLGP54098 1239 aaPredicted RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 SETD3Q86TU7 594 aaPredicted RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 MYCT1Q8N699 235 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 PYROXD1Q8WU10 500 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 RACGAP1Q9H0H5 632 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 PDE11AQ9HCR9 933 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CCDC87Q9NVE4 849 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 PCDHB8Q9UN66 801 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 GRK3P35626 688 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 MZT2BQ6NZ67 158 aa9.07□□□□□ -0.96
CACNA1C-220ENST00000399655 CIDECQ96AQ7 238 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms