RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ATP11BQ9Y2G3 1177 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 RNF135Q8IUD6 432 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 NME3Q13232 169 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 STOML1Q9UBI4 398 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 MYOM2P54296 1465 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF197O14709 1029 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DAB1O75553 588 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 VCAM1P19320 739 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 CDKL3Q8IVW4 592 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 NBPF20Q3BBV1 942 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 STAP1Q9ULZ2 295 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 GDAQ9Y2T3 454 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 WDR47O94967 919 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 ERFEQ4G0M1 354 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 EFHC2Q5JST6 749 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 RARS2Q5T160 578 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 TWF2Q6IBS0 349 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 KIAA2013Q8IYS2 634 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 SFI1A8K8P3 1242 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 TRPC1P48995 793 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 PRELPP51888 382 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 GTF2H3Q13889 308 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 HIF1AQ16665 826 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 SNX24Q9Y343 169 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 MAPK6Q16659 721 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 LRRC8BQ6P9F7 803 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 DCUN1D1Q96GG9 259 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 DDX50Q9BQ39 737 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 MRFAP1Q9Y605 127 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 H0Y626 953 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 KCNQ3O43525 872 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF189O75820 626 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 TRIM16O95361 564 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 MYBL1P10243 752 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 CLCN6P51797 869 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 ARFIP2P53365 341 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 PPM1NQ8N819 430 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 NUP85Q9BW27 656 aa13.07□□□□□ -0.32
CACNA1C-219ENST00000399649 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 C5orf58C9J3I9 102 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 DFFAO00273 331 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 KRT7P08729 469 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 SLC9A1P19634 815 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 MTMR1Q13613 665 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 FASTKD1Q53R41 847 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 ADCK1Q86TW2 530 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 CATSPER1Q8NEC5 780 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 TGS1Q96RS0 853 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 KIF2CQ99661 725 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 CHUKO15111 745 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 TCF3P15923 654 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 ORC4O43929 436 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 BBOX1O75936 387 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 GFAPP14136 432 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 UBE3AQ05086 875 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 RAD51Q06609 339 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 SYTL3Q4VX76 610 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 NUDT18Q6ZVK8 323 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 TRIM62Q9BVG3 475 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 RALAP11233 206 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 SDC4P31431 198 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 AP3B2Q13367 1082 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 TMEM270Q6UE05 265 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 LINC00301Q8NCQ3 95 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 MFAP3LO75121 409 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 MAP4P27816 1152 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 NR5A1Q13285 461 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 KRT31Q15323 416 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 CEP55Q53EZ4 464 aa13.06□□□□□ -0.32
CACNA1C-219ENST00000399649 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms