RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MORC4Q8TE76 937 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 GANQ9H2C0 597 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 TMEM206Q9H813 350 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 MORF4L1Q9UBU8 362 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 TRIM10Q9UDY6 481 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 AJAP1Q9UKB5 411 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.24
COL25A1-201ENST00000399126 CBWD6Q4V339 395 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 CBWD3Q5JTY5 395 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 CBWD5Q5RIA9 395 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 SLC39A4Q6P5W5 647 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 PDXDC1Q6P996 788 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 GJB7Q6PEY0 223 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 TAS1R3Q7RTX0 852 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 MCPH1Q8NEM0 835 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 SPATA33Q96N06 139 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 MPHOSPH6Q99547 160 aaKnown RBP16.52■□□□□ 0.24
COL25A1-201ENST00000399126 HSPBP1Q9NZL4 362 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
COL25A1-201ENST00000399126 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.23
COL25A1-201ENST00000399126 TLR2O60603 784 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 PON1P27169 355 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 SMTNP53814 917 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 CYP27A1Q02318 531 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 GPR142Q7Z601 462 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 GTF3C2Q8WUA4 911 aaPredicted RBP16.52■□□□□ 0.23
COL25A1-201ENST00000399126 GLG1Q92896 1179 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 DHX33Q9H6R0 707 aaKnown RBP16.52■□□□□ 0.23
COL25A1-201ENST00000399126 CPA4Q9UI42 421 aa16.52■□□□□ 0.23
COL25A1-201ENST00000399126 GCLCP48506 637 aaPredicted RBP16.51■□□□□ 0.23
COL25A1-201ENST00000399126 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
COL25A1-201ENST00000399126 GNG11P61952 73 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 ALCAMQ13740 583 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 EXOC3L4Q17RC7 722 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 MAP4K3Q8IVH8 894 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 GOLGA5Q8TBA6 731 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 PARK7Q99497 189 aaKnown RBP16.51■□□□□ 0.23
COL25A1-201ENST00000399126 MKNK1Q9BUB5 465 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 ZNHIT6Q9NWK9 470 aaKnown RBP16.51■□□□□ 0.23
COL25A1-201ENST00000399126 GCNT4Q9P109 453 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 CEP72Q9P209 647 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 ZNF263O14978 683 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 ARHGAP25P42331 645 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 SPIRE2Q8WWL2 714 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 NTPCRQ9BSD7 190 aaKnown RBP16.51■□□□□ 0.23
COL25A1-201ENST00000399126 NIFKQ9BYG3 293 aaKnown RBP16.51■□□□□ 0.23
COL25A1-201ENST00000399126 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
COL25A1-201ENST00000399126 LRRN2O75325 713 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 ADRB2P07550 413 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 GLRA2P23416 452 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 CNGA1P29973 690 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 HNRNPH3P31942 346 aaKnown RBP16.5■□□□□ 0.23
COL25A1-201ENST00000399126 ARID5AQ03989 594 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 TARBP2Q15633 366 aaKnown RBP16.5■□□□□ 0.23
COL25A1-201ENST00000399126 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 AFAP1L1Q8TED9 768 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 SIX2Q9NPC8 291 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 HTTP42858 3142 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 RCCD1A6NED2 376 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 ASB14A6NK59 587 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 BFSP1Q12934 665 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 ENOX2Q16206 610 aaKnown RBP16.5■□□□□ 0.23
COL25A1-201ENST00000399126 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 TRAPPC12Q8WVT3 735 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 TRAIPQ9BWF2 469 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
COL25A1-201ENST00000399126 EVPLQ92817 2033 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 EIF4A3P38919 411 aaKnown RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 ADCYAP1R1P41586 468 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 TNNT3P45378 269 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 FMO5P49326 533 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 FAM160B1Q5W0V3 765 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 HGSNATQ68CP4 663 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 ARHGAP28Q9P2N2 729 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 FEZ2Q9UHY8 353 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 PAXBP1Q9Y5B6 917 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 KIF2AO00139 706 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 SNAI1O95863 264 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 EDN1P05305 212 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 PNMA6AP0CW24 399 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-201ENST00000399126 UCHL3P15374 230 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 RAPGEF1Q13905 1077 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 FAM110CQ1W6H9 321 aa16.49■□□□□ 0.23
COL25A1-201ENST00000399126 KLHDC7AQ5VTJ3 777 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms