RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RLFQ13129 1914 aa19.24■□□□□ 0.67
HLA-DQB1-204ENST00000399084 DDX3XO00571 662 aaKnown RBP eCLIP19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 OAS2P29728 719 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 ICAM3P32942 547 aa19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 PEX3P56589 373 aa19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 KSR1Q8IVT5 923 aa19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 LRRC57Q8N9N7 239 aa19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TMEM161BQ8NDZ6 487 aa19.23■□□□□ 0.67
HLA-DQB1-204ENST00000399084 HADHBP55084 474 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TMEM132BQ14DG7 1078 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 ENOX2Q16206 610 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 EPC2Q52LR7 807 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 BRDTQ58F21 947 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 FAM102BQ5T8I3 360 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 MIS18BP1Q6P0N0 1132 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 EMBQ6PCB8 327 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 ANO5Q75V66 913 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TPCN2Q8NHX9 752 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 FAM71BQ8TC56 605 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 ACTRT1Q8TDG2 376 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 FBXL18Q96ME1 805 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 KIAA1586Q9HCI6 787 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 JPH1Q9HDC5 661 aaPredicted RBP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 PDLIM7Q9NR12 457 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 PSD3Q9NYI0 1048 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 STIM2Q9P246 746 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 SLC9A2Q9UBY0 812 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 SCAF8Q9UPN6 1271 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 NCANO14594 1321 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 PFASO15067 1338 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 EMSYQ7Z589 1322 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 KIF4AO95239 1232 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TNFAIP3P21580 790 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 NOP2P46087 812 aaKnown RBP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 NPTX2P47972 431 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TNNC1P63316 161 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 C2orf54Q08AI8 447 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 NNTQ13423 1086 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 UGCGQ16739 394 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 XKR3Q5GH77 459 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 IFT20Q8IY31 132 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 RFFLQ8WZ73 363 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 PACSIN1Q9BY11 444 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 KMT5AQ9NQR1 393 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 COQ4Q9Y3A0 265 aa19.22■□□□□ 0.67
HLA-DQB1-204ENST00000399084 ZNF541Q9H0D2 1346 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 SLC16A4O15374 487 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TRIM49P0CI25 452 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 TRIM49CP0CI26 452 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 GARTP22102 1010 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 STXBP2Q15833 593 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 SMYD5Q6GMV2 418 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 C8orf74Q6P047 294 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 MAEAQ7L5Y9 396 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 CEP170P1Q96L14 293 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 IFT74Q96LB3 600 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 GPR88Q9GZN0 384 aa19.21■□□□□ 0.67
HLA-DQB1-204ENST00000399084 IGSF9BQ9UPX0 1349 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ANKRD62A6NC57 917 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CNGA1P29973 690 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MXI1P50539 228 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 EPHB4P54760 987 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 DGKZQ13574 1117 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PPP2R5EQ16537 467 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PHLDB3Q6NSJ2 640 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ABHD15Q6UXT9 468 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 RHOT2Q8IXI1 618 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 AENQ8WTP8 325 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 U2AF1L4Q8WU68 220 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 EXOC4Q96A65 974 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PKNOX2Q96KN3 472 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CBWD1Q9BRT8 395 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 LRRC1Q9BTT6 524 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 A1CFQ9NQ94 594 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GABBR1Q9UBS5 961 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 AJAP1Q9UKB5 411 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TTC7AQ9ULT0 858 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PPME1Q9Y570 386 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CCDC169A6NNP5 214 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 SPDYE16A6NNV3 312 aaPredicted RBP19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CCDC188H7C350 402 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 NCK2O43639 380 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 STBD1O95210 358 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ATG7O95352 703 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GZMAP12544 262 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 CXCR5P32302 372 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GALCP54803 685 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 PLS1Q14651 629 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 KRT39Q6A163 491 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GJB7Q6PEY0 223 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ENOSF1Q7L5Y1 443 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 MFSD14AQ96MC6 490 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 IKZF4Q9H2S9 585 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ATP6V0A4Q9HBG4 840 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 GGA3Q9NZ52 723 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 TMEM59LQ9UK28 342 aa19.2■□□□□ 0.66
HLA-DQB1-204ENST00000399084 ZC3H11AO75152 810 aaKnown RBP eCLIP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms