RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 DNAAF5Q86Y56 855 aa12.33□□□□□ -0.43
C4orf3-201ENST00000399075 SYCP3Q8IZU3 236 aa12.33□□□□□ -0.43
C4orf3-201ENST00000399075 NAP1L3Q99457 506 aaPredicted RBP12.33□□□□□ -0.43
C4orf3-201ENST00000399075 AP1M1Q9BXS5 423 aa12.33□□□□□ -0.43
C4orf3-201ENST00000399075 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.43
C4orf3-201ENST00000399075 PLAAQ9Y263 795 aa12.33□□□□□ -0.43
C4orf3-201ENST00000399075 USP20Q9Y2K6 914 aa12.33□□□□□ -0.43
C4orf3-201ENST00000399075 PMM2O15305 246 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
C4orf3-201ENST00000399075 ICAM1P05362 532 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
C4orf3-201ENST00000399075 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
C4orf3-201ENST00000399075 TIPINQ9BVW5 301 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
C4orf3-201ENST00000399075 ST6GALNAC4Q9H4F1 302 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 PFASO15067 1338 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 ITGB5P18084 799 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 NR1D1P20393 614 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 HSD17B3P37058 310 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 CETN1Q12798 172 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 PLS1Q14651 629 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 TNIP1Q15025 636 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 MIER3Q7Z3K6 550 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 BCAS4Q8TDM0 211 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 ACCSQ96QU6 501 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 TMBIM4Q9HC24 238 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 FAM114A2Q9NRY5 505 aa12.33□□□□□ -0.44
C4orf3-201ENST00000399075 ATXN2Q99700 1313 aaKnown RBP12.32□□□□□ -0.44
C4orf3-201ENST00000399075 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 H0YGN5 161 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 K7ENM7 598 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 EBAG9O00559 213 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 CAP2P40123 477 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 FAM83AQ86UY5 434 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 SH2D3CQ8N5H7 860 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 SUFUQ9UMX1 484 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 NFS1Q9Y697 457 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 IGSF9BQ9UPX0 1349 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 GOLGA6L10A6NI86 522 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 PTENP60484 403 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 C11orf63Q6NUN7 778 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 KCNH7Q9NS40 1196 aa12.32□□□□□ -0.44
C4orf3-201ENST00000399075 DHX15O43143 795 aaKnown RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 ITGA4P13612 1032 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 PLS3P13797 630 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 CCT5P48643 541 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 BIRC3Q13489 604 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 UAP1Q16222 522 aaPredicted RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 EPC2Q52LR7 807 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 KCTD16Q68DU8 428 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 MCF2L2Q86YR7 1114 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 ARFGAP2Q8N6H7 521 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 MAP3K20Q9NYL2 800 aaKnown RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 PPP1R9AQ9ULJ8 1098 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 ZNF536O15090 1300 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 MIF4GDA9UHW6 222 aaKnown RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 FOXN3O00409 490 aaPredicted RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 FGGP02679 453 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 VAMP7P51809 220 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 PDCLQ13371 301 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 BIRC2Q13490 618 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 CEP85LQ5SZL2 805 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 PCNX4Q63HM2 1172 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 SPATS2Q86XZ4 545 aaKnown RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 OGFOD1Q8N543 542 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 HOOK2Q96ED9 719 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 PRDM16Q9HAZ2 1276 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 AMACRQ9UHK6 382 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 CCPG1Q9ULG6 757 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 UTP11Q9Y3A2 253 aaKnown RBP12.31□□□□□ -0.44
C4orf3-201ENST00000399075 EMSYQ7Z589 1322 aa12.31□□□□□ -0.44
C4orf3-201ENST00000399075 GOLGA6L10A0A0M3HER8 536 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 ASNSP08243 561 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 MYZAPP0CAP1 466 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 RARRES1P49788 294 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 GTF2BQ00403 316 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 PTPROQ16827 1216 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
C4orf3-201ENST00000399075 ARHGEF26Q96DR7 871 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms