RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 NBPF12Q5TAG4 269 aaPredicted RBP15.02■□□□□ -0
PRAME-202ENST00000398743 DCAF15Q66K64 600 aa15.02■□□□□ -0
PRAME-202ENST00000398743 XRRA1Q6P2D8 792 aa15.02■□□□□ -0
PRAME-202ENST00000398743 TRMT1LQ7Z2T5 733 aaKnown RBP15.02■□□□□ -0
PRAME-202ENST00000398743 CTNNBL1Q8WYA6 563 aaPredicted RBP15.02■□□□□ -0
PRAME-202ENST00000398743 RIN2Q8WYP3 895 aaPredicted RBP15.02■□□□□ -0
PRAME-202ENST00000398743 RFFLQ8WZ73 363 aa15.02■□□□□ -0
PRAME-202ENST00000398743 VTI1AQ96AJ9 217 aa15.02■□□□□ -0
PRAME-202ENST00000398743 AS3MTQ9HBK9 375 aa15.02■□□□□ -0
PRAME-202ENST00000398743 EPB41L5Q9HCM4 733 aa15.02■□□□□ -0
PRAME-202ENST00000398743 GPRC5CQ9NQ84 441 aa15.02■□□□□ -0
PRAME-202ENST00000398743 RNF146Q9NTX7 359 aa15.02■□□□□ -0
PRAME-202ENST00000398743 ANKEF1Q9NU02 776 aa15.02■□□□□ -0
PRAME-202ENST00000398743 NCANO14594 1321 aa15.02■□□□□ -0
PRAME-202ENST00000398743 MYH11P35749 1972 aa15.02■□□□□ -0
PRAME-202ENST00000398743 PGRMC1O00264 195 aaKnown RBP15.02□□□□□ -0.01
PRAME-202ENST00000398743 CEP104O60308 925 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 TNFAIP3P21580 790 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 GMPSP49915 693 aaPredicted RBP15.02□□□□□ -0.01
PRAME-202ENST00000398743 PAK2Q13177 524 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 KIF22Q14807 665 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 PTPROQ16827 1216 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 FAM102BQ5T8I3 360 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 TAF3Q5VWG9 929 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 PLA2G4FQ68DD2 849 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 SCYL3Q8IZE3 742 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 RDM1Q8NG50 284 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 AFAP1L1Q8TED9 768 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 WNK4Q96J92 1243 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 CALR3Q96L12 384 aaKnown RBP15.02□□□□□ -0.01
PRAME-202ENST00000398743 CALCOCO1Q9P1Z2 691 aa15.02□□□□□ -0.01
PRAME-202ENST00000398743 SLC16A4O15374 487 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 CAPN2P17655 700 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 CCND2P30279 289 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 GCLMP48507 274 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 PPP3CAQ08209 521 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 BAATQ14032 418 aaPredicted RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 ZNF746Q6NUN9 644 aaPredicted RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 NLRX1Q86UT6 975 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 NT5DC3Q86UY8 548 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 METTL13Q8N6R0 699 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.019e-22■□□□□ 9.7
PRAME-202ENST00000398743 UBE2TQ9NPD8 197 aaPredicted RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 SEPT11Q9NVA2 429 aaKnown RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 CNOT7Q9UIV1 285 aaKnown RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 EXOC7Q9UPT5 735 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 STXBP5LQ9Y2K9 1186 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 RIPK3Q9Y572 518 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 ZSCAN5CA6NGD5 496 aaPredicted RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 FOXN3O00409 490 aaPredicted RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 ZBTB48P10074 688 aaPredicted RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 ABCB4P21439 1286 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 CARSP49589 748 aaKnown RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 SMTNP53814 917 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 EPC2Q52LR7 807 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 VSIG10LQ86VR7 867 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 KLHL7Q8IXQ5 586 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 ZNF280CQ8ND82 737 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 SLC35G2Q8TBE7 412 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 IFT81Q8WYA0 676 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 GPRASP2Q96D09 838 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 OSGEPQ9NPF4 335 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 PICK1Q9NRD5 415 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 AMFRQ9UKV5 643 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 NFU1Q9UMS0 254 aa15.01□□□□□ -0.01
PRAME-202ENST00000398743 NOC2LQ9Y3T9 749 aaKnown RBP15.01□□□□□ -0.01
PRAME-202ENST00000398743 ESYT3A0FGR9 886 aa15□□□□□ -0.01
PRAME-202ENST00000398743 MAFGO15525 162 aa15□□□□□ -0.01
PRAME-202ENST00000398743 RAD51CO43502 376 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ZBTB7AO95365 584 aa15□□□□□ -0.01
PRAME-202ENST00000398743 MXI1P50539 228 aa15□□□□□ -0.01
PRAME-202ENST00000398743 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
PRAME-202ENST00000398743 C1orf220Q5T0J3 134 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ALS2CLQ60I27 953 aa15□□□□□ -0.01
PRAME-202ENST00000398743 SNRNP48Q6IEG0 339 aaKnown RBP15□□□□□ -0.01
PRAME-202ENST00000398743 LEKR1Q6ZMV7 388 aa15□□□□□ -0.01
PRAME-202ENST00000398743 SCFD2Q8WU76 684 aa15□□□□□ -0.01
PRAME-202ENST00000398743 HES6Q96HZ4 224 aa15□□□□□ -0.01
PRAME-202ENST00000398743 RUFY1Q96T51 708 aa15□□□□□ -0.01
PRAME-202ENST00000398743 AGPAT1Q99943 283 aa15□□□□□ -0.01
PRAME-202ENST00000398743 PCDHA10Q9Y5I2 948 aa15□□□□□ -0.01
PRAME-202ENST00000398743 GJA3Q9Y6H8 435 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ANKRD62A6NC57 917 aa15□□□□□ -0.01
PRAME-202ENST00000398743 CCDC169A6NNP5 214 aa15□□□□□ -0.01
PRAME-202ENST00000398743 BUB1BO60566 1050 aaPredicted RBP15□□□□□ -0.01
PRAME-202ENST00000398743 HSF2BPO75031 334 aa15□□□□□ -0.01
PRAME-202ENST00000398743 NR3C2P08235 984 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ACTN2P35609 894 aa15□□□□□ -0.01
PRAME-202ENST00000398743 OAZ1P54368 228 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ANO5Q75V66 913 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ARHGEF19Q8IW93 802 aa15□□□□□ -0.01
PRAME-202ENST00000398743 RASGEF1CQ8N431 466 aa15□□□□□ -0.01
PRAME-202ENST00000398743 TSEN2Q8NCE0 465 aaKnown RBP15□□□□□ -0.01
PRAME-202ENST00000398743 TMEM161BQ8NDZ6 487 aa15□□□□□ -0.01
PRAME-202ENST00000398743 ZKSCAN4Q969J2 545 aaPredicted RBP15□□□□□ -0.01
PRAME-202ENST00000398743 HVCN1Q96D96 273 aa15□□□□□ -0.01
PRAME-202ENST00000398743 WRNIP1Q96S55 665 aa15□□□□□ -0.01
PRAME-202ENST00000398743 SENP7Q9BQF6 1050 aa15□□□□□ -0.01
PRAME-202ENST00000398743 PLEKHA4Q9H4M7 779 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms