RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 THAP2Q9H0W7 228 aa14.19□□□□□ -0.14
PRAME-201ENST00000398741 MRPL11Q9Y3B7 192 aaKnown RBP14.19□□□□□ -0.14
PRAME-201ENST00000398741 K7ENM7 598 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 HIP1RO75146 1068 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 FAM107AO95990 144 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 GUCY2CP25092 1073 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 PTENP60484 403 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 KIF22Q14807 665 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 KCTD19Q17RG1 926 aaPredicted RBP14.18□□□□□ -0.14
PRAME-201ENST00000398741 KRT71Q3SY84 523 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 ADAT2Q7Z6V5 191 aaKnown RBP14.18□□□□□ -0.14
PRAME-201ENST00000398741 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 RHOT2Q8IXI1 618 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 FMO2Q99518 471 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 PAGR1Q9BTK6 254 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 WRAP73Q9P2S5 460 aaPredicted RBP14.18□□□□□ -0.14
PRAME-201ENST00000398741 VIL1P09327 827 aaKnown RBP14.18□□□□□ -0.14
PRAME-201ENST00000398741 ARP10275 920 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 DCAF12L1Q5VU92 463 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 PHLDB3Q6NSJ2 640 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 SLC9A9Q8IVB4 645 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 CHURC1Q8WUH1 139 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
PRAME-201ENST00000398741 AGPAT1Q99943 283 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 TAS2R14Q9NYV8 317 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 TMOD2Q9NZR1 351 aa14.18□□□□□ -0.14
PRAME-201ENST00000398741 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
PRAME-201ENST00000398741 NOVA2Q9UNW9 492 aaKnown RBP14.18□□□□□ -0.14
PRAME-201ENST00000398741 H0YHG0 523 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 FOXN3O00409 490 aaPredicted RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 PPP2R2AP63151 447 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 POU5F1Q01860 360 aaKnown RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 ZNF211Q13398 564 aaPredicted RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 INTS8Q75QN2 995 aaKnown RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 ACER1Q8TDN7 264 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 CTTNBP2NLQ9P2B4 639 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 RASAL2Q9UJF2 1139 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 ATP8A1Q9Y2Q0 1164 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 NR2E1Q9Y466 385 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 EMSYQ7Z589 1322 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 DDX39AO00148 427 aaKnown RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 IPO5O00410 1097 aaKnown RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 CDR1P51861 262 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 MYBPC2Q14324 1141 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 KIAA1755Q5JYT7 1200 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 RNF187Q5TA31 235 aaPredicted RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 MAEAQ7L5Y9 396 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 UBL4BQ8N7F7 174 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 PRMT6Q96LA8 375 aaPredicted RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 PCIF1Q9H4Z3 704 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 UBE2TQ9NPD8 197 aaPredicted RBP14.17□□□□□ -0.14
PRAME-201ENST00000398741 TMX2Q9Y320 296 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 CAPN7Q9Y6W3 813 aa14.17□□□□□ -0.14
PRAME-201ENST00000398741 GMNCA6NCL1 334 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 FAM187AA6NFU0 413 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 COPB2P35606 906 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 EIF3BP55884 814 aaKnown RBP14.16□□□□□ -0.14
PRAME-201ENST00000398741 PPARDQ03181 441 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 DHX34Q14147 1143 aaKnown RBP14.16□□□□□ -0.14
PRAME-201ENST00000398741 AOC3Q16853 763 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 PADI6Q6TGC4 694 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 MMS22LQ6ZRQ5 1243 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 YTHDF3Q7Z739 585 aaKnown RBP14.16□□□□□ -0.14
PRAME-201ENST00000398741 PALB2Q86YC2 1186 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 NEK9Q8TD19 979 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 VTI1AQ96AJ9 217 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 ERP44Q9BS26 406 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 TMEM206Q9H813 350 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 LARSQ9P2J5 1176 aaKnown RBP14.16□□□□□ -0.14
PRAME-201ENST00000398741 SLC12A6Q9UHW9 1150 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 COG5Q9UP83 839 aa14.16□□□□□ -0.14
PRAME-201ENST00000398741 PFASO15067 1338 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 SYNGAP1Q96PV0 1343 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
PRAME-201ENST00000398741 TCP10L2B9ZVM9 353 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 VAMP7P51809 220 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 MAGOHP61326 146 aaKnown RBP14.15□□□□□ -0.14
PRAME-201ENST00000398741 SPDYCQ5MJ68 293 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 MIER3Q7Z3K6 550 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 SLC20A1Q8WUM9 679 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 MAGOHBQ96A72 148 aaKnown RBP14.15□□□□□ -0.14
PRAME-201ENST00000398741 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 ALG6Q9Y672 507 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 TMEM110-MUSTN1A8MSY1 372 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 H0YIN7 160 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 PPFIA2O75334 1257 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 TMOD1P28289 359 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 USP8P40818 1118 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 DLG4P78352 724 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 MAPK7Q13164 816 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 ALCAMQ13740 583 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 TNIP1Q15025 636 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
PRAME-201ENST00000398741 ICE2Q659A1 982 aa14.15□□□□□ -0.14
PRAME-201ENST00000398741 C11orf63Q6NUN7 778 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms