RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
TFF3-202ENST00000398431 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 NR2E1Q9Y466 385 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 ZC3H11AO75152 810 aaKnown RBP eCLIP13.52□□□□□ -0.25
TFF3-202ENST00000398431 MTHFRP42898 656 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 POLGP54098 1239 aaPredicted RBP13.52□□□□□ -0.25
TFF3-202ENST00000398431 RARS2Q5T160 578 aaKnown RBP13.52□□□□□ -0.25
TFF3-202ENST00000398431 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.25
TFF3-202ENST00000398431 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 MRPL10Q7Z7H8 261 aaKnown RBP13.52□□□□□ -0.25
TFF3-202ENST00000398431 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 ZNF280BQ86YH2 543 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 BLIDQ8IZY5 108 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 DAGLBQ8NCG7 672 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 SORCS3Q9UPU3 1222 aa13.52□□□□□ -0.25
TFF3-202ENST00000398431 H0Y858 1186 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 SLC37A4O43826 429 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 LILRB3O75022 631 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 DDHD2O94830 711 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 ASGR2P07307 311 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 SKIP12755 728 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 SFPQP23246 707 aaKnown RBP eCLIP13.51□□□□□ -0.25
TFF3-202ENST00000398431 PSMA5P28066 241 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
TFF3-202ENST00000398431 SLC11A1P49279 550 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 DNM2P50570 870 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 NPEPPSP55786 919 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 PSMC5P62195 406 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 SSRP1Q08945 709 aaKnown RBP13.51□□□□□ -0.25
TFF3-202ENST00000398431 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 ATAT1Q5SQI0 421 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 KIAA1841Q6NSI8 718 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 UBALD2Q8IYN6 164 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 ZDHHC14Q8IZN3 488 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 INO80BQ9C086 356 aaPredicted RBP13.51□□□□□ -0.25
TFF3-202ENST00000398431 WRAP73Q9P2S5 460 aaPredicted RBP13.51□□□□□ -0.25
TFF3-202ENST00000398431 LIMD1Q9UGP4 676 aa13.51□□□□□ -0.25
TFF3-202ENST00000398431 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
TFF3-202ENST00000398431 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.5□□□□□ -0.25
TFF3-202ENST00000398431 DEXIO95424 95 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 NUBP1P53384 320 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 MTMR3Q13615 1198 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 GIT2Q14161 759 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 INF2Q27J81 1249 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 UBXN11Q5T124 520 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 GLB1LQ6UWU2 654 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 TMEM105Q8N8V8 129 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 RSPH1Q8WYR4 309 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
TFF3-202ENST00000398431 MINDY3Q9H8M7 445 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 CYP26B1Q9NR63 512 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 VAV3Q9UKW4 847 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 USTQ9Y2C2 406 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
TFF3-202ENST00000398431 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 ST18O60284 1047 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 CA8P35219 290 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 PPP2R5CQ13362 524 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
TFF3-202ENST00000398431 PTPN14Q15678 1187 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 GALNT17Q6IS24 598 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 TMC5Q6UXY8 1006 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 TRIM22Q8IYM9 498 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 PRPF31Q8WWY3 499 aaKnown RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 TMEM143Q96AN5 459 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 KLHL5Q96PQ7 755 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 DHX33Q9H6R0 707 aaKnown RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 KCNMB3Q9NPA1 279 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 KCNJ14Q9UNX9 436 aa13.49□□□□□ -0.25
TFF3-202ENST00000398431 ZFHX2Q9C0A1 2572 aaPredicted RBP13.49□□□□□ -0.25
TFF3-202ENST00000398431 PROB1E7EW31 1015 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 ZBTB39O15060 712 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 EFEMP2O95967 443 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
TFF3-202ENST00000398431 QARSP47897 775 aaKnown RBP13.48□□□□□ -0.25
TFF3-202ENST00000398431 RAB27AP51159 221 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 TAS1R1Q7RTX1 841 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 GPR149Q86SP6 731 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 FAM177A1Q8N128 213 aaPredicted RBP13.48□□□□□ -0.25
TFF3-202ENST00000398431 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 HAS1Q92839 578 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 PGBD4Q96DM1 585 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms