RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 WDR24Q96S15 920 aa8.05□□□□□ -1.12
RGPD1-201ENST00000398193 CEP89Q96ST8 783 aa8.05□□□□□ -1.12
RGPD1-201ENST00000398193 NFKBIZQ9BYH8 718 aa8.05□□□□□ -1.12
RGPD1-201ENST00000398193 C2orf40Q9H1Z8 148 aa8.05□□□□□ -1.12
RGPD1-201ENST00000398193 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
RGPD1-201ENST00000398193 WDR81Q562E7 1941 aa8.05□□□□□ -1.12
RGPD1-201ENST00000398193 MYH11P35749 1972 aa8.05□□□□□ -1.12
RGPD1-201ENST00000398193 EP400Q96L91 3159 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 EXTL3O43909 919 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 MAFO75444 373 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 URI1O94763 535 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 NPTX2P47972 431 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SURF1Q15526 300 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 KYAT1Q16773 422 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 CELF3Q5SZQ8 465 aaKnown RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 NCAPG2Q86XI2 1143 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 GPD1LQ8N335 351 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SEPT1Q8WYJ6 367 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 APEX2Q9UBZ4 518 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 COQ4Q9Y3A0 265 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 GRID2IPA4D2P6 1211 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 CLSTN1O94985 981 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SWSAP1Q6NVH7 229 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SMCR8Q8TEV9 937 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 TMEM8AQ9HCN3 771 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 NCANO14594 1321 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 ASAP2O43150 1006 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 KLHL30Q0D2K2 578 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 ZC2HC1CQ53FD0 456 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 CDCA2Q69YH5 1023 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SLC35F6Q8N357 371 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 OTUD5Q96G74 571 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 POLR3FQ9H1D9 316 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 RBPJLQ9UBG7 517 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SEPT9Q9UHD8 586 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 TARSL2A2RTX5 802 aaKnown RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 AKR1B10O60218 316 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 ERCC3P19447 782 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 UBA1P22314 1058 aaKnown RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 ERVK-9P63128 1117 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 PRAMEF18Q5VWM3 479 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 IER5Q5VY09 327 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 FAM124BQ9H5Z6 455 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 LZTFL1Q9NQ48 299 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 LCMT1Q9UIC8 334 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 GPC3P51654 580 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 HADHBP55084 474 aaKnown RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 STRN3Q13033 797 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 IRF2BP2Q7Z5L9 587 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 GPRC5AQ8NFJ5 357 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF215Q9UL58 517 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-201ENST00000398193 EPHB6O15197 1021 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 TCP1P17987 556 aaKnown RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 MXD4Q14582 209 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 BRD3Q15059 726 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 DCAF17Q5H9S7 520 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF484Q5JVG2 852 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 CCDC60Q8IWA6 550 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SYCE1Q8N0S2 351 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 UBXN4Q92575 508 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 MAGEA1P43355 309 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 TTLL4Q14679 1199 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF792Q3KQV3 632 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 MAMDC4Q6UXC1 1216 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 MSANTD4Q8NCY6 345 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 PARK7Q99497 189 aaKnown RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 AZI2Q9H6S1 392 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 PKD2L1Q9P0L9 805 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 DDX41Q9UJV9 622 aaKnown RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SCAF8Q9UPN6 1271 aaKnown RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 ZBTB39O15060 712 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 POLGP54098 1239 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 PEX3P56589 373 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 LAMC2Q13753 1193 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 TTLL12Q14166 644 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 TFDP1Q14186 410 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 PSMD6Q15008 389 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF710Q8N1W2 664 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SLC30A5Q8TAD4 765 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SPAG5Q96R06 1193 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SMARCAD1Q9H4L7 1026 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SLC5A4Q9NY91 659 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SFI1A8K8P3 1242 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 CLIC2O15247 247 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 H2AFXP16104 143 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-201ENST00000398193 CASP4P49662 377 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SYT11Q9BT88 431 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 HYOU1Q9Y4L1 999 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 SAR1BQ9Y6B6 198 aa8.03□□□□□ -1.12
RGPD1-201ENST00000398193 IGKV6-21A0A0C4DH24 114 aa8.02□□□□□ -1.12
RGPD1-201ENST00000398193 GSTTP1A0A1W2PQM5 241 aa8.02□□□□□ -1.12
RGPD1-201ENST00000398193 CTAGE15A4D2H0 777 aa8.02□□□□□ -1.12
RGPD1-201ENST00000398193 F8VZ95 297 aa8.02□□□□□ -1.12
RGPD1-201ENST00000398193 SOCS7O14512 581 aa8.02□□□□□ -1.12
RGPD1-201ENST00000398193 ZNF862O60290 1169 aa8.02□□□□□ -1.12
RGPD1-201ENST00000398193 CTAGE8P0CG41 777 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms