RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.54■□□□□ 0.56
APTR-201ENST00000398043 SLC17A8Q8NDX2 589 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 BSNDQ8WZ55 320 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 CCDC43Q96MW1 224 aaKnown RBP18.54■□□□□ 0.56
APTR-201ENST00000398043 PLVAPQ9BX97 442 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 TMEM117Q9H0C3 514 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 BHMT2Q9H2M3 363 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 CWH43Q9H720 699 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 HCSTQ9UBK5 93 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 PIN4Q9Y237 131 aaKnown RBP18.54■□□□□ 0.56
APTR-201ENST00000398043 TCHHQ07283 1943 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 TCF20Q9UGU0 1960 aaKnown RBP18.53■□□□□ 0.56
APTR-201ENST00000398043 TBKBP1A7MCY6 615 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 E9PMD0 336 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 STX6O43752 255 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 TSPAN1O60635 241 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 BMP15O95972 392 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 GRIN1Q05586 938 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 TFDP1Q14186 410 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 CDCA2Q69YH5 1023 aaPredicted RBP18.53■□□□□ 0.56
APTR-201ENST00000398043 FAM173BQ6P4H8 233 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 MAEAQ7L5Y9 396 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 PPM1EQ8WY54 764 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 P2RX5Q93086 422 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 MRPL38Q96DV4 380 aaKnown RBP18.53■□□□□ 0.56
APTR-201ENST00000398043 FAM105AQ9NUU6 356 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 CLIC4Q9Y696 253 aa18.53■□□□□ 0.56
APTR-201ENST00000398043 GRM6O15303 877 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 HOXA2O43364 376 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 IBSPP21815 317 aaPredicted RBP18.52■□□□□ 0.56
APTR-201ENST00000398043 CAMK1Q14012 370 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 TMEM119Q4V9L6 283 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
APTR-201ENST00000398043 MRPL10Q7Z7H8 261 aaKnown RBP18.52■□□□□ 0.56
APTR-201ENST00000398043 KCTD17Q8N5Z5 321 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 C11orf84Q9BUA3 381 aaPredicted RBP18.52■□□□□ 0.56
APTR-201ENST00000398043 TYW1Q9NV66 732 aaKnown RBP18.52■□□□□ 0.56
APTR-201ENST00000398043 PLAGL2Q9UPG8 496 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 DNM3Q9UQ16 869 aa18.52■□□□□ 0.56
APTR-201ENST00000398043 NCOR1O75376 2440 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 MEIS3P2A8K0S8 358 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 SLC26A4O43511 780 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 ITGB1P05556 798 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 AXLP30530 894 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 RAB27AP51159 221 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 MAPK7Q13164 816 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 NAALADL2Q58DX5 795 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 C1orf186Q6ZWK4 172 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 HSCBQ8IWL3 235 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 DAW1Q8N136 415 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 LRRC15Q8TF66 581 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 AK8Q96MA6 479 aa18.51■□□□□ 0.55
APTR-201ENST00000398043 MORC2Q9Y6X9 1032 aaPredicted RBP18.51■□□□□ 0.55
APTR-201ENST00000398043 INO80B-WBP1J3KQ70 363 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 SKIP12755 728 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 ARF4P18085 180 aaPredicted RBP18.5■□□□□ 0.55
APTR-201ENST00000398043 DNAJB1P25685 340 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 NAMPTP43490 491 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 FAM187BQ17R55 369 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 RINT1Q6NUQ1 792 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 MICALL1Q8N3F8 863 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 KLHL23Q8NBE8 558 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 SMG8Q8ND04 991 aaKnown RBP18.5■□□□□ 0.55
APTR-201ENST00000398043 SPPL3Q8TCT6 385 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 HELQQ8TDG4 1101 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 LPPQ93052 612 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 RUSC1Q9BVN2 902 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 CCDC113Q9H0I3 377 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 LMAN2LQ9H0V9 348 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 FZD8Q9H461 694 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 ZSCAN16Q9H4T2 348 aaPredicted RBP18.5■□□□□ 0.55
APTR-201ENST00000398043 POLD4Q9HCU8 107 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 PCDHB2Q9Y5E7 798 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 CITO14578 2027 aa18.5■□□□□ 0.55
APTR-201ENST00000398043 LRRIQ4A6NIV6 560 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 B4GALT5O43286 388 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 ERLIN2O94905 339 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 LONP1P36776 959 aaKnown RBP18.49■□□□□ 0.55
APTR-201ENST00000398043 AGMOQ6ZNB7 445 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 SYT2Q8N9I0 419 aaPredicted RBP18.49■□□□□ 0.55
APTR-201ENST00000398043 COLGALT1Q8NBJ5 622 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 RNF169Q8NCN4 708 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 KIFAP3Q92845 792 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 CCDC51Q96ER9 411 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 CPB2Q96IY4 423 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 NT5C3AQ9H0P0 336 aa18.49■□□□□ 0.55
APTR-201ENST00000398043 ALG13Q9NP73 1137 aaKnown RBP18.49■□□□□ 0.55
APTR-201ENST00000398043 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
APTR-201ENST00000398043 A0A1B0GUA9 196 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 TTLL13PA6NNM8 815 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 OFD1O75665 1012 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 EDN1P05305 212 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
APTR-201ENST00000398043 SLC12A3P55017 1021 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 COL19A1Q14993 1142 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 PTPROQ16827 1216 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 CABP7Q86V35 215 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 LRRC43Q8N309 656 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 RSPH1Q8WYR4 309 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms