RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 DMP1Q13316 513 aaPredicted RBP28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 CDCA2Q69YH5 1023 aaPredicted RBP28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 IFNLR1Q8IU57 520 aaPredicted RBP28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 FTHL17Q9BXU8 183 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 KBTBD4Q9NVX7 518 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 FAM237AA0A1B0GTK4 181 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 A0A1W2PPC1 479 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 DENND3A2RUS2 1198 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 GRXCR1A8MXD5 290 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 ENPP3O14638 875 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 FAM13AO94988 1023 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 PLS3P13797 630 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 LONRF3Q496Y0 759 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 ZBTB8OSQ8IWT0 167 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 ADAM2Q99965 735 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 NFKBIZQ9BYH8 718 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 TNMDQ9H2S6 317 aa28.02■■■□□ 2.08
TMEM55B-202ENST00000398020 EFCAB14O75071 495 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 GADD45BO75293 160 aaPredicted RBP28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 TBCAO75347 108 aaKnown RBP28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 CSPP1Q1MSJ5 1256 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 GRAMD1CQ8IYS0 662 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 MYOCDQ8IZQ8 938 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 MYCT1Q8N699 235 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 DNAJC19Q96DA6 116 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 PYM1Q9BRP8 204 aaKnown RBP28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 KMT5AQ9NQR1 393 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 PIN4Q9Y237 131 aaKnown RBP28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 PTPRSQ13332 1948 aa28.01■■■□□ 2.07
TMEM55B-202ENST00000398020 SLC16A4O15374 487 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 ACTN4O43707 911 aaKnown RBP28■■■□□ 2.07
TMEM55B-202ENST00000398020 ERLIN2O94905 339 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 ATP2A2P16615 1042 aaKnown RBP28■■■□□ 2.07
TMEM55B-202ENST00000398020 AFMP43652 599 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 FAM117BQ6P1L5 589 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 CEP57L1Q8IYX8 460 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 C17orf75Q9HAS0 396 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 CASP1P29466 404 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 C2orf40Q9H1Z8 148 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 TSPYL2Q9H2G4 693 aaPredicted RBP28■■■□□ 2.07
TMEM55B-202ENST00000398020 PARVGQ9HBI0 331 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 LARSQ9P2J5 1176 aaKnown RBP28■■■□□ 2.07
TMEM55B-202ENST00000398020 USP20Q9Y2K6 914 aa28■■■□□ 2.07
TMEM55B-202ENST00000398020 B4GALT5O43286 388 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 TSPAN1O60635 241 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 AMHP03971 560 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 SLFN14P0C7P3 912 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 IDEP14735 1019 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 ZSCAN20P17040 1043 aaPredicted RBP27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 ZNF131P52739 623 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 DSC3Q14574 896 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 AMHR2Q16671 573 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 CPB2Q96IY4 423 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 AGPAT5Q9NUQ2 364 aa27.99■■■□□ 2.07
TMEM55B-202ENST00000398020 UPP2O95045 317 aa27.98■■■□□ 2.07
TMEM55B-202ENST00000398020 TRIM9Q9C026 710 aa27.98■■■□□ 2.07
TMEM55B-202ENST00000398020 CCDC113Q9H0I3 377 aa27.98■■■□□ 2.07
TMEM55B-202ENST00000398020 BLZF1Q9H2G9 400 aa27.98■■■□□ 2.07
TMEM55B-202ENST00000398020 MAGEF1Q9HAY2 307 aa27.98■■■□□ 2.07
TMEM55B-202ENST00000398020 RGS18Q9NS28 235 aa27.98■■■□□ 2.07
TMEM55B-202ENST00000398020 HOXA11P31270 313 aaPredicted RBP27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 TMEM87AQ8NBN3 555 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 SLC9A7Q96T83 725 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 ARHGAP28Q9P2N2 729 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 TTLL13PA6NNM8 815 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 ZNF202O95125 648 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 EDN1P05305 212 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 PRKCBP05771 671 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 RABGGTBP53611 331 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 SMTNP53814 917 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 AMPD3Q01432 767 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 MAPK6Q16659 721 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 SPIRE2Q8WWL2 714 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 NTPCRQ9BSD7 190 aaKnown RBP27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 LRRC27Q9C0I9 530 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 FZD8Q9H461 694 aa27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 PRMT7Q9NVM4 692 aaPredicted RBP27.97■■■□□ 2.07
TMEM55B-202ENST00000398020 K7ERI5 159 aa27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 EFNA5P52803 228 aa27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 TWF2Q6IBS0 349 aaKnown RBP27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 CDR2LQ86X02 465 aaPredicted RBP27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 SFR1Q86XK3 245 aa27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 HERC6Q8IVU3 1022 aa27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 TMEM161BQ8NDZ6 487 aa27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 PAGE5Q96GU1 130 aa27.96■■■□□ 2.07
TMEM55B-202ENST00000398020 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 TRAK2O60296 914 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 PRPF40AO75400 957 aaKnown RBP27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 ARF4P18085 180 aaPredicted RBP27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 ASIC1P78348 528 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 LRIT3Q3SXY7 679 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 HABP4Q5JVS0 413 aaKnown RBP27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 SLC24A5Q71RS6 500 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 FMR1NBQ8N0W7 255 aaPredicted RBP27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 PHOSPHO2Q8TCD6 241 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 CHST12Q9NRB3 414 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 PANK4Q9NVE7 773 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 TBC1D7Q9P0N9 293 aa27.95■■■□□ 2.07
TMEM55B-202ENST00000398020 USP25Q9UHP3 1055 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms