RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 DSEQ9UL01 958 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 PCDHA13Q9Y5I0 950 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 CFAP65Q6ZU64 1925 aaKnown RBP9.65□□□□□ -0.86
TRPM1-202ENST00000397795 SAC3D1A6NKF1 404 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 PDZK1P1A8MUH7 402 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.65□□□□□ -0.86
TRPM1-202ENST00000397795 CCDC188H7C350 402 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 COPEO14579 308 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 MGRN1O60291 552 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 ZPR1O75312 459 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 AKAP5P24588 427 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 RASGRF1Q13972 1273 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 SGSM1Q2NKQ1 1148 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 CYP4F22Q6NT55 531 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 TAS2R42Q7RTR8 314 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 FGD2Q7Z6J4 655 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 BHMTQ93088 406 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 TGS1Q96RS0 853 aaKnown RBP9.65□□□□□ -0.86
TRPM1-202ENST00000397795 SPRTNQ9H040 489 aaPredicted RBP9.65□□□□□ -0.86
TRPM1-202ENST00000397795 STOML2Q9UJZ1 356 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 CEP170Q5SW79 1584 aa9.65□□□□□ -0.86
TRPM1-202ENST00000397795 CFAP99D6REC4 459 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 SGK1O00141 431 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 CCNCP24863 283 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 PPIDQ08752 370 aaKnown RBP9.65□□□□□ -0.87
TRPM1-202ENST00000397795 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.87
TRPM1-202ENST00000397795 SFR1Q86XK3 245 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 KIF2BQ8N4N8 673 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 C19orf18Q8NEA5 215 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 KRT84Q9NSB2 600 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 LRCH1Q9Y2L9 728 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 GSTO1P78417 241 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 EPS8Q12929 822 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 MMRN1Q13201 1228 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 ZFAND2BQ8WV99 257 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 CAPSLQ8WWF8 208 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.87
TRPM1-202ENST00000397795 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.65□□□□□ -0.87
TRPM1-202ENST00000397795 STON1Q9Y6Q2 735 aa9.65□□□□□ -0.87
TRPM1-202ENST00000397795 MAGI1Q96QZ7 1491 aaPredicted RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 FOSL1P15407 271 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 TBX2Q13207 712 aaPredicted RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 TAB1Q15750 504 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 FAM180AQ6UWF9 173 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PPHLN1Q8NEY8 458 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 CEP95Q96GE4 821 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PLIN2Q99541 437 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 TMBIM4Q9HC24 238 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 NLRC4Q9NPP4 1024 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 IARS2Q9NSE4 1012 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 FKBP14Q9NWM8 211 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 DNAJC5BQ9UF47 199 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 ZSCAN9O15535 394 aaPredicted RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 TRAPPC3O43617 180 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 NPTXRO95502 500 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 RALBP11234 206 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 MECOMQ03112 1051 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 BTKQ06187 659 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 SLC5A9Q2M3M2 681 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 KRT39Q6A163 491 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 TATDN2Q93075 761 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 KCNK16Q96T55 309 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 NDNQ99608 321 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 ANGEL1Q9UNK9 670 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 MAGI3Q5TCQ9 1506 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 E9PCH4 1651 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 MEIS1O00470 390 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 OPLAHO14841 1288 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 RNF113AO15541 343 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 P4HA1P13674 534 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 CACNA2D1P54289 1103 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 MTTPP55157 894 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PRAMEP78395 509 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 BNC1Q01954 994 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 USH1GQ495M9 461 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 SPDYE2Q495Y8 402 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 SGO2Q562F6 1265 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 ZC3H12AQ5D1E8 599 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 ARMC4Q5T2S8 1044 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PIGOQ8TEQ8 1089 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 DEPDC1BQ8WUY9 529 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 INPP5DQ92835 1189 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 MNTQ99583 582 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 APOL4Q9BPW4 351 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 EXOSC4Q9NPD3 245 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 CCDC59Q9P031 241 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PTGS2P35354 604 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 PURAQ00577 322 aaKnown RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 DR1Q01658 176 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 ATP1A4Q13733 1029 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 LACTB2Q53H82 288 aaPredicted RBP9.64□□□□□ -0.87
TRPM1-202ENST00000397795 CYGBQ8WWM9 190 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 RFT1Q96AA3 541 aa9.64□□□□□ -0.87
TRPM1-202ENST00000397795 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms