RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZNF662Q6ZS27 426 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 SH3BP5LQ7L8J4 393 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ZNF572Q7Z3I7 529 aaPredicted RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 CDAN1Q8IWY9 1227 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 MYCT1Q8N699 235 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 RBM46Q8TBY0 533 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 MIPOL1Q8TD10 442 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 AGAP11Q8TF27 550 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TEKT4Q8WW24 435 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 NT5C3AQ9H0P0 336 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 DHX36Q9H2U1 1008 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 KCTD10Q9H3F6 313 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 PCIF1Q9H4Z3 704 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 OSGEPQ9NPF4 335 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 GCNT4Q9P109 453 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 CEP72Q9P209 647 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 SWAP70Q9UH65 585 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 PPME1Q9Y570 386 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 A0A1W2PRG0 241 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 GCOM1H8Y6P7 765 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 ABLIM1O14639 778 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 RAD51CO43502 376 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 NDUFB10O96000 172 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 MMP10P09238 476 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 MYZAPP0CAP1 466 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SPATA31C1P0DKV0 1188 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 UCHL3P15374 230 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TPP2P29144 1249 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 ALDH3A1P30838 453 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 HOXD13P35453 343 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 DGKZQ13574 1117 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 GIT2Q14161 759 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 RRP1BQ14684 758 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 TAF11Q15544 211 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SLC18A3Q16572 532 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 DBN1Q16643 649 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 IFI16Q16666 785 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 AOC3Q16853 763 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SIAH1Q8IUQ4 282 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TRIM59Q8IWR1 403 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 LMNTD2Q8IXW0 634 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 MREGQ8N565 214 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 CCDC197Q8NCU1 140 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 U2AF1L4Q8WU68 220 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 BICD1Q96G01 975 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 FAM167BQ9BTA0 163 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 CELF4Q9BZC1 486 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 DPH5Q9H2P9 285 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 PCDHGA4Q9Y5G9 962 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 GRID2IPA4D2P6 1211 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TMEM150BA6NC51 233 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 MSH4O15457 936 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ZSCAN9O15535 394 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 CREB3O43889 395 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SORBS3O60504 671 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TBCAO75347 108 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 FAM163BP0C2L3 166 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ITGA4P13612 1032 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 PON1P27169 355 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 HNRNPH3P31942 346 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 PPP1R2P41236 205 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SLC12A3P55017 1021 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ZNF211Q13398 564 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ODF2Q5BJF6 829 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ALKBH5Q6P6C2 394 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 DAAM2Q86T65 1068 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TBC1D1Q86TI0 1168 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 FBXO11Q86XK2 927 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 MYLK4Q86YV6 388 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 GLYCTKQ8IVS8 523 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TAF4BQ92750 862 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 FAM163AQ96GL9 167 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 CSRNP1Q96S65 589 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 AMNQ9BXJ7 453 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 COA1Q9GZY4 146 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TAF1DQ9H5J8 278 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 ACP6Q9NPH0 428 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 HOMER2Q9NSB8 354 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.42□□□□□ -1.544e-12■■■■□ 23.7
SSR1-202ENST00000397511 FAM198AQ9UFP1 575 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 AMACRQ9UHK6 382 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 BLOC1S6Q9UL45 172 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ARIH1Q9Y4X5 557 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 PCDHA2Q9Y5H9 948 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 RREB1Q92766 1687 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 AFF2P51816 1311 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 IGKV6D-41A0A0C4DH26 115 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SMIM23A6NLE4 172 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 TMEM110-MUSTN1A8MSY1 372 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 PDLIM1O00151 329 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 NPTXRO95502 500 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 VIMP08670 466 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 ALADP13716 330 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 MRPS35P82673 323 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 CDK17Q00537 523 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 USP4Q13107 963 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 BIRC3Q13489 604 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ZNF268Q14587 947 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 KNOP1Q1ED39 458 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms