RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 SNF8Q96H20 258 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 FHDC1Q9C0D6 1143 aaPredicted RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 SLITRK6Q9H5Y7 841 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 CLIC2O15247 247 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 RALBP11234 206 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 MRPS25P82663 173 aaKnown RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 AFF4Q9UHB7 1163 aaKnown RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 MOSPD1Q9UJG1 213 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 CFAP74Q9C0B2 1584 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 RGS5O15539 181 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 FKBP3Q00688 224 aaKnown RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 GSPT2Q8IYD1 628 aaKnown RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 TSPYL6Q8N831 410 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 KLHL25Q9H0H3 589 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 A0A1W2PQ27 194 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 A0A1W2PQ64 194 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 A0A1W2PQD8 194 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 SERPINB4P48594 390 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 PARP10Q53GL7 1025 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 RABGAP1LQ5R372 815 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 NARS2Q96I59 477 aaKnown RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 CALR3Q96L12 384 aaKnown RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 HSPBP1Q9NZL4 362 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 DSG1Q02413 1049 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 RHOT2Q8IXI1 618 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 COG1Q8WTW3 980 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 NUP85Q9BW27 656 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 DMAP1Q9NPF5 467 aaPredicted RBP10.95□□□□□ -0.66
COL4A4-201ENST00000396625 AIPL1Q9NZN9 384 aa10.95□□□□□ -0.66
COL4A4-201ENST00000396625 NEMP1O14524 444 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 MYL1P05976 194 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 PSMA3P25788 255 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 CCND2P30279 289 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 HSPA2P54652 639 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ARPP19P56211 112 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ABCE1P61221 599 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 MDH1BQ5I0G3 518 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 C16orf89Q6UX73 402 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 FANCBQ8NB91 859 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 C19orf44Q9H6X5 657 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 TMEM206Q9H813 350 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ANAPC7Q9UJX3 599 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 CCDC188H7C350 402 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 C17orf80Q9BSJ5 609 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 GOLPH3LQ9H4A5 285 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 UTP6Q9NYH9 597 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 UHRF1BP1Q6BDS2 1440 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 XPO1O14980 1071 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 MXI1P50539 228 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 OR6B2Q6IFH4 312 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 USP44Q9H0E7 712 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 H2AFY2Q9P0M6 372 aaPredicted RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 NLRP11P59045 1033 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 USP40Q9NVE5 1235 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 TTC7AQ9ULT0 858 aaPredicted RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 GOLGA8IPA6NC78 632 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 KRT16P08779 473 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 CENPAP49450 140 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 SPDYAQ5MJ70 313 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 GALNT4Q8N4A0 578 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 CYFIP2Q96F07 1278 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 MAN1B1Q9UKM7 699 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 MTRF1O75570 445 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 FOSL2P15408 326 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 GCFC2P16383 781 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
COL4A4-201ENST00000396625 THEMIS2Q5TEJ8 643 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ATXN7L3BQ96GX2 97 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 VAMP4O75379 141 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 CALB1P05937 261 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 PCIF1Q9H4Z3 704 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 UBAP1Q9NZ09 502 aa10.94□□□□□ -0.66
COL4A4-201ENST00000396625 ZBED6P86452 979 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ICA1Q05084 483 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 HEATR4Q86WZ0 1026 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 DTX3LQ8TDB6 740 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 PLB1Q6P1J6 1458 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 COL17A1Q9UMD9 1497 aaPredicted RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 TK2O00142 265 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 CSTF3Q12996 717 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 EAPPQ56P03 285 aaPredicted RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ZBTB33Q86T24 672 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 LONP2Q86WA8 852 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 TM6SF1Q9BZW5 370 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 CXorf56Q9H5V9 222 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 WDR17Q8IZU2 1322 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 EIF2S1P05198 315 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 MAPRE1Q15691 268 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ZBED8Q8IZ13 594 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 SNRNP27Q8WVK2 155 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 EPN3Q9H201 632 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms