RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 PHF20Q9BVI0 1012 aa18.26■□□□□ 0.51
CLTA-203ENST00000396603 ZBP1Q9H171 429 aa18.26■□□□□ 0.51
CLTA-203ENST00000396603 CYP26B1Q9NR63 512 aa18.26■□□□□ 0.51
CLTA-203ENST00000396603 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
CLTA-203ENST00000396603 PIN4Q9Y237 131 aaKnown RBP18.26■□□□□ 0.51
CLTA-203ENST00000396603 WDFY4Q6ZS81 3184 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 P4HBP07237 508 aaKnown RBP18.25■□□□□ 0.51
CLTA-203ENST00000396603 CTSAP10619 480 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 FGFR4P22455 802 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 RFC5P40937 340 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 MTHFRP42898 656 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 CATSPER4Q7RTX7 472 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 SRGAP1Q7Z6B7 1085 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 NEK8Q86SG6 692 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 UBALD2Q8IYN6 164 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 GJA10Q969M2 543 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 ASIC4Q96FT7 647 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 IGSF21Q96ID5 467 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 ZNF668Q96K58 619 aaPredicted RBP18.25■□□□□ 0.51
CLTA-203ENST00000396603 RIPOR3Q96MK2 946 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 IRF2BPLQ9H1B7 796 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 DHX33Q9H6R0 707 aaKnown RBP18.25■□□□□ 0.51
CLTA-203ENST00000396603 IFT122Q9HBG6 1241 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 AGPAT5Q9NUQ2 364 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 VAV3Q9UKW4 847 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 COL4A3BPQ9Y5P4 624 aa18.25■□□□□ 0.51
CLTA-203ENST00000396603 CNTNAP2Q9UHC6 1331 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 CCDC194A0A1B0GVG4 234 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 ASAP2O43150 1006 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 CLASP2O75122 1294 aaKnown RBP18.24■□□□□ 0.51
CLTA-203ENST00000396603 INF2Q27J81 1249 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 NOMO2Q5JPE7 1267 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 LLGL2Q6P1M3 1020 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 PPFIBP1Q86W92 1011 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 C4orf19Q8IY42 314 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 VPS52Q8N1B4 723 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 TBC1D13Q9NVG8 400 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 USTQ9Y2C2 406 aa18.24■□□□□ 0.51
CLTA-203ENST00000396603 SLC37A4O43826 429 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLTA-203ENST00000396603 CSDE1O75534 798 aaKnown RBP18.23■□□□□ 0.51
CLTA-203ENST00000396603 OFD1O75665 1012 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 ANKRD1Q15327 319 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 EPHA7Q15375 998 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 LETM2Q2VYF4 491 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 OTUD6AQ7L8S5 288 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 MRPL10Q7Z7H8 261 aaKnown RBP18.23■□□□□ 0.51
CLTA-203ENST00000396603 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 CNNM3Q8NE01 707 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 URGCPQ8TCY9 931 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 PSPC1Q8WXF1 523 aaKnown RBP18.23■□□□□ 0.51
CLTA-203ENST00000396603 NLRP4Q96MN2 994 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 UBN1Q9NPG3 1134 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 SORCS3Q9UPU3 1222 aa18.23■□□□□ 0.51
CLTA-203ENST00000396603 TMEM150BA6NC51 233 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 EML1O00423 815 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 SEC24BO95487 1268 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 CXCL14O95715 111 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 GALTP07902 379 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 MTMR3Q13615 1198 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 KIAA1841Q6NSI8 718 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 PLCD3Q8N3E9 789 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 TMEM87AQ8NBN3 555 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 WASF1Q92558 559 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 CEP170P1Q96L14 293 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 TMEM175Q9BSA9 504 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 NRDE2Q9H7Z3 1164 aa18.22■□□□□ 0.51
CLTA-203ENST00000396603 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.21■□□□□ 0.51
CLTA-203ENST00000396603 AXLP30530 894 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 RNASELQ05823 741 aaKnown RBP18.21■□□□□ 0.51
CLTA-203ENST00000396603 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 SCRN1Q12765 414 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 ZDHHC14Q8IZN3 488 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 PRSS33Q8NF86 280 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 CCDC51Q96ER9 411 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 AIFM3Q96NN9 605 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 LXNQ9BS40 222 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 ZSWIM4Q9H7M6 989 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 PCDHB2Q9Y5E7 798 aa18.21■□□□□ 0.51
CLTA-203ENST00000396603 NT5C1B-RDH14C9J2C7 533 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 INPPL1O15357 1258 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 CCNT1O60563 726 aaKnown RBP18.2■□□□□ 0.5
CLTA-203ENST00000396603 PFKFB2O60825 505 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 YWHABP31946 246 aaKnown RBP18.2■□□□□ 0.5
CLTA-203ENST00000396603 STK3Q13188 491 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 ATAT1Q5SQI0 421 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 PLA2G4FQ68DD2 849 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 ZBTB33Q86T24 672 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 TMEM173Q86WV6 379 aaPredicted RBP18.2■□□□□ 0.5
CLTA-203ENST00000396603 PRPF31Q8WWY3 499 aaKnown RBP18.2■□□□□ 0.5
CLTA-203ENST00000396603 HAS1Q92839 578 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 LPPQ93052 612 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 SH2D3AQ9BRG2 576 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 EMILIN2Q9BXX0 1053 aa18.2■□□□□ 0.5
CLTA-203ENST00000396603 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
CLTA-203ENST00000396603 POMKQ9H5K3 350 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms