RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ALDH3A1P30838 453 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 DSG3P32926 999 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 EPHX2P34913 555 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 PHBP35232 272 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SLMAPQ14BN4 828 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 R3HDM1Q15032 1099 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 B4GALNT4Q76KP1 1039 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SHCBP1Q8NEM2 672 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 GOLPH3LQ9H4A5 285 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 GINS2Q9Y248 185 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 MSH4O15457 936 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZRANB2O95218 330 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 RINT1Q6NUQ1 792 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF720Q7Z2F6 126 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF560Q96MR9 790 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SPATC1LQ9H0A9 340 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZCCHC17Q9NP64 241 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 RBAKQ9NYW8 714 aaPredicted RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 EBAG9O00559 213 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 UCHL3P15374 230 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 KLRK1P26718 216 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 EPHB4P54760 987 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 RBL2Q08999 1139 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SNRNP35Q16560 246 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ELMSAN1Q6PJG2 1045 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SPATA33Q96N06 139 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ST6GALNAC4Q9H4F1 302 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 C4AP0C0L4 1744 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 LRP5O75197 1615 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 DDTLA6NHG4 134 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MANSC4A6NHS7 340 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TJP3O95049 919 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GCNT1Q02742 428 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 E2F4Q16254 413 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TTI2Q6NXR4 508 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TNIP3Q96KP6 325 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 LSM14BQ9BX40 385 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 FAM114A2Q9NRY5 505 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ADGRG1Q9Y653 693 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NFASCO94856 1347 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 DENND3A2RUS2 1198 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CD4P01730 458 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CNGA1P29973 690 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 LRMPQ12912 555 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SND1Q7KZF4 910 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GPD1LQ8N335 351 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 REEP2Q9BRK0 252 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 FMO5P49326 533 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 BAATQ14032 418 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SGSM1Q2NKQ1 1148 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 C10orf67Q8IYJ2 551 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SMYD4Q8IYR2 804 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SLC5A5Q92911 643 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TSNARE1Q96NA8 513 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 INPP4AQ96PE3 977 aaPredicted RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MTMR9Q96QG7 549 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 AGO2Q9UKV8 859 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 AKT3Q9Y243 479 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PPIL2Q13356 520 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MAPRE1Q15691 268 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MFSD14CQ5VZR4 134 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PIGOQ8TEQ8 1089 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 OTUD5Q96G74 571 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 VIPAS39Q9H9C1 493 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GABBR1Q9UBS5 961 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NOC2LQ9Y3T9 749 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NFKBIAP25963 317 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PIK3CAP42336 1068 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NOVP48745 357 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 RASSF2P50749 326 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GPC5P78333 572 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 C3orf67Q6ZVT6 689 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 EIF1ADQ8N9N8 165 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MMP19Q99542 508 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MSTO1Q9BUK6 570 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ASB7Q9H672 318 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ICE1Q9Y2F5 2266 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 RIOK3O14730 519 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF484Q5JVG2 852 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CERS5Q8N5B7 392 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MTMR8Q96EF0 704 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 FMO2Q99518 471 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PKD2L1Q9P0L9 805 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 GLI3P10071 1580 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ATP8B3O60423 1300 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PFDN6O15212 129 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 HERVK_113P62684 666 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ILF2Q12905 390 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NR1H3Q13133 447 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SEPT14Q6ZU15 432 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 PCGF5Q86SE9 256 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 RIOX2Q8IUF8 465 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 CCDC105Q8IYK2 499 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 RDH13Q8NBN7 331 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 NSMCE1Q8WV22 266 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 SLITRK6Q9H5Y7 841 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 ANKFY1Q9P2R3 1169 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 KRIT1O00522 736 aa3.64□□□□□ -1.83
VPS13C-203ENST00000395896 TXNP10599 105 aaKnown RBP3.64□□□□□ -1.83
VPS13C-203ENST00000395896 MAP2K1Q02750 393 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms