RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CNNM1Q9NRU3 951 aa9.56□□□□□ -0.88
MSH5-205ENST00000395853 SAMSN1Q9NSI8 373 aaKnown RBP9.56□□□□□ -0.88
MSH5-205ENST00000395853 SEPT10Q9P0V9 454 aa9.56□□□□□ -0.88
MSH5-205ENST00000395853 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
MSH5-205ENST00000395853 MAST3O60307 1309 aa9.56□□□□□ -0.88
MSH5-205ENST00000395853 PHF20L1A8MW92 1017 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 BTBD19C9JJ37 291 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 PRPF3O43395 683 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 CLASP2O75122 1294 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 DGKIO75912 1065 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 HSPD1P10809 573 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 DRD4P21917 467 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 MYL5Q02045 173 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 KPNB1Q14974 876 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 ARL13BQ3SXY8 428 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 CCDC122Q5T0U0 273 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 TMTC4Q5T4D3 741 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 CYP4F22Q6NT55 531 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 OLFM4Q6UX06 510 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 RAD9BQ6WBX8 426 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 VPS36Q86VN1 386 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 SAMD14Q8IZD0 417 aaPredicted RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 ASAP3Q8TDY4 903 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 RAPGEF5Q92565 580 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 C8orf48Q96LL4 319 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 ARHGEF3Q9NR81 526 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 NKX1-2Q9UD57 310 aaPredicted RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 TMCC3Q9ULS5 477 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 PCNTO95613 3336 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 SPEF2Q9C093 1822 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 BACH1O14867 736 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 ORC4O43929 436 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 CYP1A1P04798 512 aaPredicted RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 TPBGLP0DKB5 382 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 COL6A2P12110 1019 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 VAV1P15498 845 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 EPS15P42566 896 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 MXI1P50539 228 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 DCTN2Q13561 401 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 PRKG1Q13976 671 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 METTL21CQ5VZV1 264 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 PCNX4Q63HM2 1172 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 PPP2R2DQ66LE6 453 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 LMBRD2Q68DH5 695 aaPredicted RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 MIGA2Q7L4E1 593 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 NIM1KQ8IY84 436 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 VGLL2Q8N8G2 317 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 SUPT20HQ8NEM7 779 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 CAGE1Q8TC20 777 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 FNDC8Q8TC99 324 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 GATA6Q92908 595 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 BRF1Q92994 677 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 TCF12Q99081 682 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 TUT1Q9H6E5 874 aaKnown RBP9.55□□□□□ -0.88
MSH5-205ENST00000395853 ECT2Q9H8V3 914 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 PSTPIP2Q9H939 334 aa9.55□□□□□ -0.88
MSH5-205ENST00000395853 F8W031 263 aaPredicted RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 GOLGA8TH3BQL2 631 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 RARAP10276 462 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 MYH7P12883 1935 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 RPL17P18621 184 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 COL4A5P29400 1685 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 PTDSS1P48651 473 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 GPC3P51654 580 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 RELAQ04206 551 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 KRT32Q14532 448 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 LRRC8BQ6P9F7 803 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 TAOK1Q7L7X3 1001 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 NAT14Q8WUY8 206 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 STARD8Q92502 1023 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 RPGRQ92834 1020 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 ITPKCQ96DU7 683 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CHMP6Q96FZ7 201 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CCDC43Q96MW1 224 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 MCOLN1Q9GZU1 580 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 RAB17Q9H0T7 212 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 GLT8D2Q9H1C3 349 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 IFT122Q9HBG6 1241 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 TRIM17Q9Y577 477 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 LOC105371267A0A1B0GV96 52 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 TTLL13PA6NNM8 815 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 SNAP23O00161 211 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 WNT7AO00755 349 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 NVLO15381 856 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 TSPAN1O60635 241 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CBFA2T3O75081 653 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 PRKACBP22694 351 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 MCAMP43121 646 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ACADSBP45954 432 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ARFIP2P53365 341 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms