RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SPG21Q9NZD8 308 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 USP15Q9Y4E8 981 aaPredicted RBP20.16■□□□□ 0.82
CXCL12-204ENST00000395793 B4GALT3O60512 393 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 PPM1AP35813 382 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 RFC5P40937 340 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 LAMTOR4Q0VGL1 99 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 XKR9Q5GH70 373 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 PDE12Q6L8Q7 609 aaKnown RBP20.15■□□□□ 0.82
CXCL12-204ENST00000395793 PSPC1Q8WXF1 523 aaKnown RBP20.15■□□□□ 0.82
CXCL12-204ENST00000395793 INO80BQ9C086 356 aaPredicted RBP20.15■□□□□ 0.82
CXCL12-204ENST00000395793 ZSWIM4Q9H7M6 989 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 ENTPD7Q9NQZ7 604 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 PPME1Q9Y570 386 aa20.15■□□□□ 0.82
CXCL12-204ENST00000395793 DCXO43602 365 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 ZNF623O75123 536 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
CXCL12-204ENST00000395793 SRGAP2CP0DJJ0 459 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 BCAR1P56945 870 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 CALCRLQ16602 461 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 UBXN11Q5T124 520 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 FERMT3Q86UX7 667 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 TPH2Q8IWU9 490 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 BCL7CQ8WUZ0 217 aaPredicted RBP20.14■□□□□ 0.81
CXCL12-204ENST00000395793 CDCA3Q99618 268 aaPredicted RBP20.14■□□□□ 0.81
CXCL12-204ENST00000395793 HSD17B14Q9BPX1 270 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 MRPL9Q9BYD2 267 aaKnown RBP20.14■□□□□ 0.81
CXCL12-204ENST00000395793 TMEM60Q9H2L4 133 aa20.14■□□□□ 0.81
CXCL12-204ENST00000395793 HOXA11P31270 313 aaPredicted RBP20.13■□□□□ 0.81
CXCL12-204ENST00000395793 GUCY1B3Q02153 619 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 AGMOQ6ZNB7 445 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 OTUD6AQ7L8S5 288 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 SRGAP1Q7Z6B7 1085 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 CCDC83Q8IWF9 413 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 MTMR9Q96QG7 549 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 NRDE2Q9H7Z3 1164 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 TTC12Q9H892 705 aaPredicted RBP20.13■□□□□ 0.81
CXCL12-204ENST00000395793 TBC1D13Q9NVG8 400 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 PUF60Q9UHX1 559 aaKnown RBP20.13■□□□□ 0.81
CXCL12-204ENST00000395793 PCDHA12Q9UN75 941 aa20.13■□□□□ 0.81
CXCL12-204ENST00000395793 A0A087WWV3 80 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 NEMFO60524 1076 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 ZC3H11AO75152 810 aaKnown RBP eCLIP20.12■□□□□ 0.81
CXCL12-204ENST00000395793 OFD1O75665 1012 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 LYPLA2O95372 231 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 ALADP13716 330 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 TXKP42681 527 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 RAB27AP51159 221 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 NOMO2Q5JPE7 1267 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 LLGL2Q6P1M3 1020 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 TMEM184AQ6ZMB5 413 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 RNF135Q8IUD6 432 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 RNF149Q8NC42 400 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 SUSD6Q92537 303 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 POP1Q99575 1024 aaKnown RBP20.12■□□□□ 0.81
CXCL12-204ENST00000395793 KIF2CQ99661 725 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 MTRQ99707 1265 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 NGRNQ9NPE2 291 aaKnown RBP20.12■□□□□ 0.81
CXCL12-204ENST00000395793 DNAJB4Q9UDY4 337 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 MUTYHQ9UIF7 546 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 INPP5FQ9Y2H2 1132 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 PCDHB2Q9Y5E7 798 aa20.12■□□□□ 0.81
CXCL12-204ENST00000395793 TECTAO75443 2155 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 POTEMA6NI47 508 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 GAS2O43903 313 aaKnown RBP20.11■□□□□ 0.81
CXCL12-204ENST00000395793 AFF1P51825 1210 aaKnown RBP20.11■□□□□ 0.81
CXCL12-204ENST00000395793 KRT17Q04695 432 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 TRIM29Q14134 588 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 SYCE2Q6PIF2 218 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 GLB1LQ6UWU2 654 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 TMC7Q7Z402 723 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 EXOC8Q8IYI6 725 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 ASAP3Q8TDY4 903 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 TCP11Q8WWU5 503 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 S1PR5Q9H228 398 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 CDH22Q9UJ99 828 aa20.11■□□□□ 0.81
CXCL12-204ENST00000395793 C2orf71A6NGG8 1288 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 PRR33A8MZF0 331 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 LOC730098B7Z3J9 87 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 SKIP12755 728 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 ANKRD54Q6NXT1 300 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 MRPL10Q7Z7H8 261 aaKnown RBP20.1■□□□□ 0.81
CXCL12-204ENST00000395793 ZNF280BQ86YH2 543 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 MRPL43Q8N983 215 aaKnown RBP20.1■□□□□ 0.81
CXCL12-204ENST00000395793 PIGOQ8TEQ8 1089 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 AUTS2Q8WXX7 1259 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 APOL5Q9BWW9 433 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 VN1R3Q9BXE9 311 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 ZBP1Q9H171 429 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
CXCL12-204ENST00000395793 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 TSPAN1O60635 241 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 DDHD2O94830 711 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 GALTP07902 379 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 ATP2B1P20020 1258 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 MCM7P33993 719 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 TECP42680 631 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 SLC11A1P49279 550 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 ALDH7A1P49419 539 aaKnown RBP20.09■□□□□ 0.81
CXCL12-204ENST00000395793 RARRES1P49788 294 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 PTENP60484 403 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms