RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 FBXL21Q9UKT6 434 aa17.85■□□□□ 0.45
SNCA-205ENST00000394991 CACNA1IQ9P0X4 2223 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 DOCK6Q96HP0 2047 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 A0A087WZ62 844 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 KLF18A0A0U1RQI7 1052 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 TMEM150BA6NC51 233 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 LILRB3O75022 631 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 OFD1O75665 1012 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 CNPP09543 421 aaKnown RBP17.84■□□□□ 0.45
SNCA-205ENST00000394991 GLB1LQ6UWU2 654 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 ZNF280BQ86YH2 543 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 RSPH1Q8WYR4 309 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
SNCA-205ENST00000394991 UNC45AQ9H3U1 944 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 FAM105AQ9NUU6 356 aa17.84■□□□□ 0.45
SNCA-205ENST00000394991 PIN4Q9Y237 131 aaKnown RBP17.84■□□□□ 0.45
SNCA-205ENST00000394991 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
SNCA-205ENST00000394991 KRBA1A5PL33 1030 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 SPDYE4A6NLX3 237 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 MSH4O15457 936 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 CHMP2AO43633 222 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 STBD1O95210 358 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 SSBP05455 408 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNCA-205ENST00000394991 ADD1P35611 737 aaKnown RBP17.83■□□□□ 0.44
SNCA-205ENST00000394991 LETM2Q2VYF4 491 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 MTERF2Q49AM1 385 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 RSAD2Q8WXG1 361 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 GJA10Q969M2 543 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 C6orf50Q9HD87 102 aa17.83■□□□□ 0.44
SNCA-205ENST00000394991 MIA3Q5JRA6 1907 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 IGKV6-21A0A0C4DH24 114 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 MED19A0JLT2 244 aaPredicted RBP17.82■□□□□ 0.44
SNCA-205ENST00000394991 CARNS1A5YM72 827 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 ZNF623O75123 536 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 DDHD2O94830 711 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 CFHP08603 1231 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 SFPQP23246 707 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNCA-205ENST00000394991 KLRC2P26717 231 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 AFF1P51825 1210 aaKnown RBP17.82■□□□□ 0.44
SNCA-205ENST00000394991 RNASELQ05823 741 aaKnown RBP17.82■□□□□ 0.44
SNCA-205ENST00000394991 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 AGMOQ6ZNB7 445 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
SNCA-205ENST00000394991 SLC5A5Q92911 643 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 RMDN1Q96DB5 314 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 SH2D3AQ9BRG2 576 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 EMILIN2Q9BXX0 1053 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 IGSF9Q9P2J2 1179 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 SEPT9Q9UHD8 586 aaPredicted RBP17.82■□□□□ 0.44
SNCA-205ENST00000394991 R4GN57 208 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 DNAH14Q0VDD8 3507 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 CACNA1BQ00975 2339 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 MYH15Q9Y2K3 1946 aa17.82■□□□□ 0.44
SNCA-205ENST00000394991 GAS7O60861 476 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 SKIP12755 728 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 JAK3P52333 1124 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 RCAN1P53805 252 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 KSR1Q8IVT5 923 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 RASEFQ8IZ41 740 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 CMASQ8NFW8 434 aaPredicted RBP17.81■□□□□ 0.44
SNCA-205ENST00000394991 RIT2Q99578 217 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 NIFKQ9BYG3 293 aaKnown RBP17.81■□□□□ 0.44
SNCA-205ENST00000394991 MAN1C1Q9NR34 630 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 GPR179Q6PRD1 2367 aa17.81■□□□□ 0.44
SNCA-205ENST00000394991 ARID2Q68CP9 1835 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 LMNAP02545 664 aaKnown RBP17.8■□□□□ 0.44
SNCA-205ENST00000394991 SFNP31947 248 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 RAB27AP51159 221 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 LRCH2Q5VUJ6 765 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 ZNF410Q86VK4 478 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 RHPN2Q8IUC4 686 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SNCA-205ENST00000394991 MYADMQ96S97 322 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 TEKT3Q9BXF9 490 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 SUCLA2Q9P2R7 463 aaPredicted RBP17.8■□□□□ 0.44
SNCA-205ENST00000394991 WNT16Q9UBV4 365 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
SNCA-205ENST00000394991 CA14Q9ULX7 337 aa17.8■□□□□ 0.44
SNCA-205ENST00000394991 CDC42EP1Q00587 391 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 XKR3Q5GH77 459 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 CATSPER4Q7RTX7 472 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 CCDC12Q8WUD4 166 aaPredicted RBP17.79■□□□□ 0.44
SNCA-205ENST00000394991 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 TBC1D17Q9HA65 648 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 WDR6Q9NNW5 1121 aaKnown RBP17.79■□□□□ 0.44
SNCA-205ENST00000394991 MRPL17Q9NRX2 175 aaKnown RBP17.79■□□□□ 0.44
SNCA-205ENST00000394991 AGPAT5Q9NUQ2 364 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 MARCH5Q9NX47 278 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 PCDHB2Q9Y5E7 798 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 PATJQ8NI35 1801 aa17.79■□□□□ 0.44
SNCA-205ENST00000394991 CLUHO75153 1309 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 TPRP12270 2363 aaKnown RBP17.78■□□□□ 0.44
SNCA-205ENST00000394991 STK25O00506 426 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 C2CD2LO14523 706 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 NRP1O14786 923 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 PSMD10O75832 226 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms