RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 C19orf67A6NJJ6 358 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 HIDE1A8MVS5 230 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 NT5C1B-RDH14C9J2C7 533 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 NEMFO60524 1076 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 ZNF623O75123 536 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 OFD1O75665 1012 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 EOMESO95936 686 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 SRGAP2CP0DJJ0 459 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 ZSCAN20P17040 1043 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-205ENST00000394892 ARL2P36404 184 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 NRIP1P48552 1158 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 RARRES1P49788 294 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 IL17AQ16552 155 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 KCNT2Q6UVM3 1135 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 MRPL10Q7Z7H8 261 aaKnown RBP9.89□□□□□ -0.83
ATG4A-205ENST00000394892 RBM23Q86U06 439 aaKnown RBP9.89□□□□□ -0.83
ATG4A-205ENST00000394892 CATSPER3Q86XQ3 398 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 SLC39A11Q8N1S5 342 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 SMG8Q8ND04 991 aaKnown RBP9.89□□□□□ -0.83
ATG4A-205ENST00000394892 C8orf76Q96K31 380 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 FBXL18Q96ME1 805 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 SCLT1Q96NL6 688 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 NAP1L4Q99733 375 aaKnown RBP9.89□□□□□ -0.83
ATG4A-205ENST00000394892 VN1R3Q9BXE9 311 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 BRMS1Q9HCU9 246 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 CHST12Q9NRB3 414 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 AGPAT5Q9NUQ2 364 aa9.89□□□□□ -0.83
ATG4A-205ENST00000394892 PIN4Q9Y237 131 aaKnown RBP9.89□□□□□ -0.83
ATG4A-205ENST00000394892 ATG2AQ2TAZ0 1938 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 MBTPS2O43462 519 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 BAG4O95429 457 aaKnown RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 EDN1P05305 212 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 GLRA2P23416 452 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 U2AF2P26368 475 aaKnown RBP eCLIP9.88□□□□□ -0.832e-7■□□□□ 9.2
ATG4A-205ENST00000394892 RFC5P40937 340 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 DNM2P50570 870 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 POLGP54098 1239 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 PTENP60484 403 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 CDC42EP1Q00587 391 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 SMAD4Q13485 552 aaKnown RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 CAPSQ13938 189 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 SMAD2Q15796 467 aaKnown RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 CATSPER4Q7RTX7 472 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 ZNF280BQ86YH2 543 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 IFNLR1Q8IU57 520 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 RNF149Q8NC42 400 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 PSPC1Q8WXF1 523 aaKnown RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 BSNDQ8WZ55 320 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 MRPS27Q92552 414 aaKnown RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 PRRX2Q99811 253 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 EIF2AQ9BY44 585 aaKnown RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 FOXP1Q9H334 677 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 NRDE2Q9H7Z3 1164 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 POLD4Q9HCU8 107 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 ANKEF1Q9NU02 776 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 FAM105AQ9NUU6 356 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 TBC1D13Q9NVG8 400 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 DNAJB4Q9UDY4 337 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 CD207Q9UJ71 328 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 CDH22Q9UJ99 828 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 BARX2Q9UMQ3 279 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-205ENST00000394892 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 PCDHB2Q9Y5E7 798 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 PCDHB12Q9Y5F1 795 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 EVPLQ92817 2033 aa9.88□□□□□ -0.83
ATG4A-205ENST00000394892 B4GALT5O43286 388 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 MARCH6O60337 910 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 TSPAN1O60635 241 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 DDHD2O94830 711 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 EYA4O95677 639 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 LAG3P18627 525 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 SFPQP23246 707 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 TECP42680 631 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 NDUFV1P49821 464 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 BCAR1P56945 870 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 UBE3AQ05086 875 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 MBTD1Q05BQ5 628 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 DUSP6Q16828 381 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 HERC4Q5GLZ8 1057 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 SPOUT1Q5T280 376 aaKnown RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 PLPP4Q5VZY2 271 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 TWF2Q6IBS0 349 aaKnown RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 HFE2Q6ZVN8 426 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 SRGAP1Q7Z6B7 1085 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 CDR2LQ86X02 465 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 NOSTRINQ8IVI9 506 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 THNSL1Q8IYQ7 743 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 LRRC43Q8N309 656 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 AUTS2Q8WXX7 1259 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 CPB2Q96IY4 423 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 TMX3Q96JJ7 454 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms