RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 CCDC172P0C7W6 258 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 GLE1Q53GS7 698 aaKnown RBP20.22■□□□□ 0.83
SIL1-202ENST00000394817 XKR9Q5GH70 373 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 PLA2G4FQ68DD2 849 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 NLRX1Q86UT6 975 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 XXYLT1Q8NBI6 393 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 RDH13Q8NBN7 331 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 MS4A14Q96JA4 679 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 SH2D3AQ9BRG2 576 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 MOV10L1Q9BXT6 1211 aaKnown RBP20.22■□□□□ 0.83
SIL1-202ENST00000394817 PCIF1Q9H4Z3 704 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
SIL1-202ENST00000394817 GPRC5CQ9NQ84 441 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 HSPBP1Q9NZL4 362 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 EMSYQ7Z589 1322 aa20.22■□□□□ 0.83
SIL1-202ENST00000394817 VAMP7P51809 220 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 PEX3P56589 373 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 SULF1Q8IWU6 871 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 AENQ8WTP8 325 aaKnown RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 HVCN1Q96D96 273 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 DMGDHQ9UI17 866 aaKnown RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 PACSIN2Q9UNF0 486 aaPredicted RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 PCDHA10Q9Y5I2 948 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 SLC16A4O15374 487 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 TNFRSF8P28908 595 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 NPEPPSP55786 919 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 MCCD1P59942 119 aaPredicted RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 DLG4P78352 724 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 VGLL4Q14135 290 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 ANO5Q75V66 913 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 TPCN2Q8NHX9 752 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 NSUN6Q8TEA1 469 aaKnown RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
SIL1-202ENST00000394817 HDAC7Q8WUI4 952 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 STIM2Q9P246 746 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 PRDM4Q9UKN5 801 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 SNCAIPQ9Y6H5 919 aa20.21■□□□□ 0.83
SIL1-202ENST00000394817 NCANO14594 1321 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 KIF4AO95239 1232 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 KCNA2P16389 499 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 MATR3P43243 847 aaKnown RBP eCLIP20.2■□□□□ 0.82
SIL1-202ENST00000394817 TNNT3P45378 269 aaPredicted RBP20.2■□□□□ 0.82
SIL1-202ENST00000394817 NOP2P46087 812 aaKnown RBP20.2■□□□□ 0.82
SIL1-202ENST00000394817 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.82
SIL1-202ENST00000394817 KIF22Q14807 665 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 TMEM132BQ14DG7 1078 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 C1orf220Q5T0J3 134 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 FAM102BQ5T8I3 360 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 PHLDB3Q6NSJ2 640 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 C8orf74Q6P047 294 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 SLFN11Q7Z7L1 901 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 GSPT2Q8IYD1 628 aaKnown RBP20.2■□□□□ 0.82
SIL1-202ENST00000394817 VTI1AQ96AJ9 217 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 SELENOOQ9BVL4 669 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 MAF1Q9H063 256 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 MED4Q9NPJ6 270 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 HPCAL4Q9UM19 191 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 AFG3L2Q9Y4W6 797 aa20.2■□□□□ 0.82
SIL1-202ENST00000394817 PMM2O15305 246 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 PPP3CAQ08209 521 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 CETN1Q12798 172 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 RPS6KA1Q15418 735 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 EPC2Q52LR7 807 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 DNAAF5Q86Y56 855 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 FAM71BQ8TC56 605 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 NFASCO94856 1347 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
SIL1-202ENST00000394817 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 RGS20O76081 388 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 DNA2P51530 1060 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 MAP4K3Q8IVH8 894 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 GLYCTKQ8IVS8 523 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 LMBR1Q8WVP7 490 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 TAF4BQ92750 862 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 CYP39A1Q9NYL5 469 aa20.19■□□□□ 0.82
SIL1-202ENST00000394817 MYPNQ86TC9 1320 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 DKC1O60832 514 aaKnown RBP eCLIP20.18■□□□□ 0.82
SIL1-202ENST00000394817 STAM2O75886 525 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 CYP2C19P33261 490 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 NPTX2P47972 431 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 SMTNP53814 917 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 GALCP54803 685 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 DMP1Q13316 513 aaPredicted RBP20.18■□□□□ 0.82
SIL1-202ENST00000394817 OTUD6AQ7L8S5 288 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 PLEKHO2Q8TD55 490 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 KIFAP3Q92845 792 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 ATP6V0A1Q93050 837 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 L3MBTL3Q96JM7 780 aaPredicted RBP20.18■□□□□ 0.82
SIL1-202ENST00000394817 CDHR1Q96JP9 859 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 PBKQ96KB5 322 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 ACAD9Q9H845 621 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 C17orf75Q9HAS0 396 aa20.18■□□□□ 0.82
SIL1-202ENST00000394817 TBX20Q9UMR3 447 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms