RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CDC25CP30307 473 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 KLHL30Q0D2K2 578 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 FUT2Q10981 343 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 ALCAMQ13740 583 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 KRT31Q15323 416 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PTGISQ16647 500 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 LONP2Q86WA8 852 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 SAMD3Q8N6K7 520 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 MB21D1Q8N884 522 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 ANKRD42Q8N9B4 389 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 MYCBPAPQ8TBZ2 947 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 KIFAP3Q92845 792 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 HAUS1Q96CS2 278 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 MXRA8Q9BRK3 442 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PLCB1Q9NQ66 1216 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 KMT5AQ9NQR1 393 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 MAP3K20Q9NYL2 800 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 TSKSQ9UJT2 592 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 UTP11Q9Y3A2 253 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 NUP188Q5SRE5 1749 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 ABCA3Q99758 1704 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 LRRIQ4A6NIV6 560 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PRPF6O94906 941 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 EYA4O95677 639 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 ABCD1P33897 745 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 EPHX2P34913 555 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 COASYQ13057 564 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 MFSD4BQ5TF39 518 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PHLDB3Q6NSJ2 640 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 TYW1BQ6NUM6 668 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PADI6Q6TGC4 694 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 VPS52Q8N1B4 723 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 GUF1Q8N442 669 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 TC2NQ8N9U0 490 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 RNPC3Q96LT9 517 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 ZFATQ9P243 1243 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 DDX20Q9UHI6 824 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 FAF1Q9UNN5 650 aaPredicted RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 GLI3P10071 1580 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 CLIC2O15247 247 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 SLC37A4O43826 429 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 NR3C2P08235 984 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 TMOD1P28289 359 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PSMC5P62195 406 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 KLC1Q07866 573 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 SNAPC2Q13487 334 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 TRPC3Q13507 836 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 MTERF2Q49AM1 385 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 DENND2CQ68D51 928 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 XRRA1Q6P2D8 792 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 ZC3H18Q86VM9 953 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 FAM186BQ8IYM0 893 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 FUKQ8N0W3 1084 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 KCTD17Q8N5Z5 321 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 SEC16BQ96JE7 1060 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 SMC6Q96SB8 1091 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 DDX23Q9BUQ8 820 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 SPC25Q9HBM1 224 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 RHBDL2Q9NX52 303 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 GPRC5DQ9NZD1 345 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 PPP1R9AQ9ULJ8 1098 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 GINS2Q9Y248 185 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 BAZ2BQ9UIF8 2168 aaKnown RBP6.12□□□□□ -1.43
RFFL-202ENST00000394597 KLHL33A6NCF5 533 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 MAFGO15525 162 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RHOBTB3O94955 611 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 ATP1A1P05023 1023 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 SLURP2P0DP57 97 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 FCER1AP12319 257 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 VEGFAP15692 232 aaPredicted RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 TNNI1P19237 187 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 SREBF1P36956 1147 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RAD23BP54727 409 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 MRPS35P82673 323 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.11□□□□□ -1.43
RFFL-202ENST00000394597 NAALADL2Q58DX5 795 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 CFAP157Q5JU67 520 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RAD9BQ6WBX8 426 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 PHLDB2Q86SQ0 1253 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TRIM74Q86UV6 250 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TRIM73Q86UV7 250 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 SFR1Q86XK3 245 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 ERO1BQ86YB8 467 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 MYLK4Q86YV6 388 aaPredicted RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 MFN1Q8IWA4 741 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 CHST13Q8NET6 341 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RAB3IL1Q8TBN0 382 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 MMP19Q99542 508 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RIT2Q99578 217 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 LXNQ9BS40 222 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 CNOT10Q9H9A5 744 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 CTTNBP2NLQ9P2B4 639 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 PCDHA10Q9Y5I2 948 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TOGARAM1Q9Y4F4 1720 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 ESYT3A0FGR9 886 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TRIM49BA6NDI0 452 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 BUB1O43683 1085 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 AFPP02771 609 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 VCAM1P19320 739 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 CCND1P24385 295 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms