RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PRELPP51888 382 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 ADCY2Q08462 1091 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 ZNF564Q8TBZ8 553 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-203ENST00000394536 SLC20A1Q8WUM9 679 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 SPATA31A5Q5VU36 1347 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 SPATA31A7Q8IWB4 1347 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 PODXLO00592 558 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 CLDN3O15551 220 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 TMED2Q15363 201 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
PCDH1-203ENST00000394536 IRF2BP2Q7Z5L9 587 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 PASD1Q8IV76 773 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 XXYLT1Q8NBI6 393 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 SEMA4AQ9H3S1 761 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 SHMT1P34896 483 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 NSFP46459 744 aaKnown RBP17.35■□□□□ 0.37
PCDH1-203ENST00000394536 ZNF131P52739 623 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 HHATQ5VTY9 493 aa17.35■□□□□ 0.37
PCDH1-203ENST00000394536 SCAF8Q9UPN6 1271 aaKnown RBP17.35■□□□□ 0.37
PCDH1-203ENST00000394536 EML1O00423 815 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 SLC8A1P32418 973 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 ARSHQ5FYA8 562 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 NCAPGQ9BPX3 1015 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 GANQ9H2C0 597 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 ACP6Q9NPH0 428 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 KIF1AQ12756 1690 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 KIF13AQ9H1H9 1805 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 MIF4GDA9UHW6 222 aaKnown RBP17.34■□□□□ 0.37
PCDH1-203ENST00000394536 ALDH3A1P30838 453 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 LIN9Q5TKA1 542 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 EPS8L3Q8TE67 593 aaKnown RBP17.34■□□□□ 0.37
PCDH1-203ENST00000394536 KAT2BQ92831 832 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 C1orf112Q9NSG2 853 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 TAS2R14Q9NYV8 317 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 TTC7AQ9ULT0 858 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-203ENST00000394536 AGTPBP1Q9UPW5 1226 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 DDTLA6NHG4 134 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-203ENST00000394536 CHRNA3P32297 505 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 BFSP1Q12934 665 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 MYO1EQ12965 1108 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 LMBRD2Q68DH5 695 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-203ENST00000394536 RNF207Q6ZRF8 634 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 HAUS1Q96CS2 278 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 ARHGEF26Q96DR7 871 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 PRR12Q9ULL5 1215 aa17.34■□□□□ 0.37
PCDH1-203ENST00000394536 WDR91A4D1P6 747 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 TCP11X1B4DZS4 312 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 RAD17O75943 681 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 TMEM253P0C7T8 217 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 BRAFP15056 766 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.37
PCDH1-203ENST00000394536 CEP55Q53EZ4 464 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 NT5DC3Q86UY8 548 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.37
PCDH1-203ENST00000394536 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.33■□□□□ 0.37
PCDH1-203ENST00000394536 AGPAT3Q9NRZ7 376 aa17.33■□□□□ 0.37
PCDH1-203ENST00000394536 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 F8VZ95 297 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 H0YIN7 160 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 HSPA6P17066 643 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 PCK1P35558 622 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 IFI35P80217 286 aaPredicted RBP17.33■□□□□ 0.36
PCDH1-203ENST00000394536 TMC3Q7Z5M5 1100 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 LRRC34Q8IZ02 419 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 KIRREL3Q8IZU9 778 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 KCTD10Q9H3F6 313 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 PCDHAC2Q9Y5I4 1007 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 NEBLO76041 1014 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 SLC12A3P55017 1021 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 NEUROG2Q9H2A3 272 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 TMEM206Q9H813 350 aa17.33■□□□□ 0.36
PCDH1-203ENST00000394536 FAM187AA6NFU0 413 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 EPHA7Q15375 998 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 KYNUQ16719 465 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 KIF2BQ8N4N8 673 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 C9orf72Q96LT7 481 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 TISP43B9A030 160 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 SHOX2O60902 331 aaPredicted RBP17.32■□□□□ 0.36
PCDH1-203ENST00000394536 PEX19P40855 299 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 CC2D2BQ6DHV5 1058 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 NLRX1Q86UT6 975 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 KCNQ5Q9NR82 932 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 SLC16A3O15427 465 aaKnown RBP17.32■□□□□ 0.36
PCDH1-203ENST00000394536 TM4SF1P30408 202 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 ECE1P42892 770 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 DMP1Q13316 513 aaPredicted RBP17.32■□□□□ 0.36
PCDH1-203ENST00000394536 MTM1Q13496 603 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 CBWD6Q4V339 395 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 CBWD3Q5JTY5 395 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 CBWD5Q5RIA9 395 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 AGBL2Q5U5Z8 902 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 CYB5D1Q6P9G0 228 aa17.32■□□□□ 0.36
PCDH1-203ENST00000394536 RNF25Q96BH1 459 aaPredicted RBP17.32■□□□□ 0.36
PCDH1-203ENST00000394536 IQCGQ9H095 443 aaKnown RBP17.32■□□□□ 0.36
PCDH1-203ENST00000394536 CARD9Q9H257 536 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms