RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 GCNT3O95395 438 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 TMEM253P0C7T8 217 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 SOX5P35711 763 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 MSH2P43246 934 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 DHX34Q14147 1143 aaKnown RBP17.72■□□□□ 0.43
CNP-201ENST00000393888 HYIQ5T013 277 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 TBC1D9BQ66K14 1250 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 CCDC137Q6PK04 289 aaKnown RBP17.72■□□□□ 0.43
CNP-201ENST00000393888 CATSPER3Q86XQ3 398 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 CPNE8Q86YQ8 564 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 SLC17A8Q8NDX2 589 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 ZNF483Q8TF39 744 aaPredicted RBP17.72■□□□□ 0.43
CNP-201ENST00000393888 RMDN2Q96LZ7 410 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 ZNF287Q9HBT7 754 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 BATF3Q9NR55 127 aa17.72■□□□□ 0.43
CNP-201ENST00000393888 ASTN1O14525 1302 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 KIF13BQ9NQT8 1826 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 LRRN2O75325 713 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 HOXA7P31268 230 aaPredicted RBP17.71■□□□□ 0.43
CNP-201ENST00000393888 BNIP1Q12981 228 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 SEPT14Q6ZU15 432 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 NAP1L3Q99457 506 aaPredicted RBP17.71■□□□□ 0.43
CNP-201ENST00000393888 USP40Q9NVE5 1235 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 ADAM22Q9P0K1 906 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 ANKIB1Q9P2G1 1089 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
CNP-201ENST00000393888 NAV1Q8NEY1 1877 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 PHF2O75151 1096 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 CCND1P24385 295 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 TNIP1Q15025 636 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 ARMC2Q8NEN0 867 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 ARHGEF2Q92974 986 aaKnown RBP17.71■□□□□ 0.43
CNP-201ENST00000393888 YIPF3Q9GZM5 350 aa17.71■□□□□ 0.43
CNP-201ENST00000393888 DDX60LQ5H9U9 1706 aaKnown RBP17.71■□□□□ 0.42
CNP-201ENST00000393888 NCANO14594 1321 aa17.71■□□□□ 0.42
CNP-201ENST00000393888 EP400Q96L91 3159 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 RAD21O60216 631 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 SMNDC1O75940 238 aaKnown RBP eCLIP17.7■□□□□ 0.42
CNP-201ENST00000393888 SUN1O94901 812 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 LMNB1P20700 586 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 TNFAIP3P21580 790 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 POLD1P28340 1107 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 CLK2P49760 499 aaKnown RBP17.7■□□□□ 0.42
CNP-201ENST00000393888 ANKRD20A2Q5SQ80 823 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 ANKRD20A1Q5TYW2 823 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 ANKRD20A3Q5VUR7 823 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 TRIM68Q6AZZ1 485 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 TAOK1Q7L7X3 1001 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 RTFDC1Q9BY42 306 aaPredicted RBP17.7■□□□□ 0.42
CNP-201ENST00000393888 ANKRD2Q9GZV1 360 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 PSTPIP2Q9H939 334 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 CNOT7Q9UIV1 285 aaKnown RBP17.7■□□□□ 0.42
CNP-201ENST00000393888 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
CNP-201ENST00000393888 USP17L10C9JJH3 530 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 TULP1O00294 542 aaPredicted RBP17.7■□□□□ 0.42
CNP-201ENST00000393888 SMARCA1P28370 1054 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 ABL2P42684 1182 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 COG2Q14746 738 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 MIS18BP1Q6P0N0 1132 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 KCTD1Q719H9 257 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 CCDC105Q8IYK2 499 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 PFASO15067 1338 aa17.7■□□□□ 0.42
CNP-201ENST00000393888 PDXKO00764 312 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 IRX1P78414 480 aaPredicted RBP17.69■□□□□ 0.42
CNP-201ENST00000393888 RNASELQ05823 741 aaKnown RBP17.69■□□□□ 0.42
CNP-201ENST00000393888 MPP2Q14168 576 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 CDCA2Q69YH5 1023 aaPredicted RBP17.69■□□□□ 0.42
CNP-201ENST00000393888 SLC20A1Q8WUM9 679 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 ARHGEF3Q9NR81 526 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 CTTNBP2NLQ9P2B4 639 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 PCDHA3Q9Y5H8 950 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 ARFGEF1Q9Y6D6 1849 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 PNMA6FA0A0J9YX94 578 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 TRIM49P0CI25 452 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 TRIM49CP0CI26 452 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 MYBL1P10243 752 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 MGAT5Q09328 741 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 ZNF746Q6NUN9 644 aaPredicted RBP17.69■□□□□ 0.42
CNP-201ENST00000393888 VSTM1Q6UX27 236 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 EPM2AIP1Q7L775 607 aaPredicted RBP17.69■□□□□ 0.42
CNP-201ENST00000393888 SPATA21Q7Z572 469 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 GPR88Q9GZN0 384 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 HOMER3Q9NSC5 361 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 TBK1Q9UHD2 729 aa17.69■□□□□ 0.42
CNP-201ENST00000393888 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 ATMINO43313 823 aaPredicted RBP17.68■□□□□ 0.42
CNP-201ENST00000393888 ATP2A2P16615 1042 aaKnown RBP17.68■□□□□ 0.42
CNP-201ENST00000393888 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
CNP-201ENST00000393888 PPP4CP60510 307 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 CTTNQ14247 550 aaKnown RBP17.68■□□□□ 0.42
CNP-201ENST00000393888 MESDQ14696 234 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
CNP-201ENST00000393888 TNFAIP8L3Q5GJ75 292 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
CNP-201ENST00000393888 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms