RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 LAMTOR4Q0VGL1 99 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 TMEM184AQ6ZMB5 413 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 CATSPER4Q7RTX7 472 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 DIS3L2Q8IYB7 885 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 CDCA3Q99618 268 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 HSD17B14Q9BPX1 270 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 JPH2Q9BR39 696 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 INO80BQ9C086 356 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 XPNPEP1Q9NQW7 623 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 AGPAT5Q9NUQ2 364 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 PPME1Q9Y570 386 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 TECTAO75443 2155 aa20.39■□□□□ 0.86
PDLIM7-205ENST00000393551 MARCH6O60337 910 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 B4GALT3O60512 393 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 SRGAP2CP0DJJ0 459 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 PPM1AP35813 382 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 RFC5P40937 340 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 BCAR1P56945 870 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 EMC2Q15006 297 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 RNF135Q8IUD6 432 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 TPH2Q8IWU9 490 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 MTMR9Q96QG7 549 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 EIF2AK1Q9BQI3 630 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 S1PR5Q9H228 398 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 ZSWIM4Q9H7M6 989 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 ENTPD7Q9NQZ7 604 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 TBC1D13Q9NVG8 400 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 PUF60Q9UHX1 559 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 MUTYHQ9UIF7 546 aa20.39■□□□□ 0.85
PDLIM7-205ENST00000393551 MUC6Q6W4X9 2439 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 PRR33A8MZF0 331 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 OFD1O75665 1012 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 BAG4O95429 457 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 AFF1P51825 1210 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 KRT17Q04695 432 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 XKR9Q5GH70 373 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 UBXN11Q5T124 520 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 SYCE2Q6PIF2 218 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 AGMOQ6ZNB7 445 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 FERMT3Q86UX7 667 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 BCL7CQ8WUZ0 217 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 PSPC1Q8WXF1 523 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 SUSD6Q92537 303 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 POP1Q99575 1024 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 MRPL9Q9BYD2 267 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 NRDE2Q9H7Z3 1164 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 BRMS1Q9HCU9 246 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 NGRNQ9NPE2 291 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 PCDHA12Q9UN75 941 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 PCDHB2Q9Y5E7 798 aa20.38■□□□□ 0.85
PDLIM7-205ENST00000393551 LOC730098B7Z3J9 87 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 CALCRLQ16602 461 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 OTUD6AQ7L8S5 288 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 TMC7Q7Z402 723 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 SRGAP1Q7Z6B7 1085 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 MRPL10Q7Z7H8 261 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 MRPL43Q8N983 215 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 RNF149Q8NC42 400 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 TMEM60Q9H2L4 133 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 TTC12Q9H892 705 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 DNAJB4Q9UDY4 337 aa20.37■□□□□ 0.85
PDLIM7-205ENST00000393551 ZNF318Q5VUA4 2279 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 A0A087WWV3 80 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 C2orf71A6NGG8 1288 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 ZC3H11AO75152 810 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 LYPLA2O95372 231 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 PLA2G5P39877 138 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 TXKP42681 527 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 ALDH7A1P49419 539 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 RAB27AP51159 221 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 CBX2Q14781 532 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 HERC4Q5GLZ8 1057 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 NOMO2Q5JPE7 1267 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 ANKRD54Q6NXT1 300 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 LLGL2Q6P1M3 1020 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 EXOC8Q8IYI6 725 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 VN1R3Q9BXE9 311 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 INPP5FQ9Y2H2 1132 aa20.36■□□□□ 0.85
PDLIM7-205ENST00000393551 NEMFO60524 1076 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 GALTP07902 379 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 SKIP12755 728 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 TECP42680 631 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 GLB1LQ6UWU2 654 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 ZNF280BQ86YH2 543 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 TCP11Q8WWU5 503 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 IGSF21Q96ID5 467 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 KIF2CQ99661 725 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 MTRQ99707 1265 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 CDH22Q9UJ99 828 aa20.35■□□□□ 0.85
PDLIM7-205ENST00000393551 FSD2A1L4K1 749 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 POTEMA6NI47 508 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 ASAP2O43150 1006 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 GAS2O43903 313 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 DDHD2O94830 711 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 PTENP60484 403 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 SMC1AQ14683 1233 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 VPS52Q8N1B4 723 aa20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 SMG8Q8ND04 991 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-205ENST00000393551 ASAP3Q8TDY4 903 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms