RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ASXL2Q76L83 1435 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 A0A0B4J269 797 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 GABBR2O75899 941 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 ATP5BP06576 529 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 GSPT1P15170 499 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 AKAP5P24588 427 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 DPP6P42658 865 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 MC1RQ01726 317 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 GOLGA8DPQ0D2H9 430 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 COASYQ13057 564 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 AUHQ13825 339 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 BECN1Q14457 450 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 NFIL3Q16649 462 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 ZNF423Q2M1K9 1284 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 RPS26P11Q5JNZ5 115 aaPredicted RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 FYB2Q5VWT5 728 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 ABHD17CQ6PCB6 329 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 SYDE1Q6ZW31 735 aaPredicted RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 DYMQ7RTS9 669 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 AVL9Q8NBF6 648 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 MRPS27Q92552 414 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 MIPEPQ99797 713 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 C7orf25Q9BPX7 421 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 JAM3Q9BX67 310 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 POFUT1Q9H488 388 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 BAG2O95816 211 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 SYN1P17600 705 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 PSMC4P43686 418 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 MMP14P50281 582 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 ZNF143P52747 638 aaPredicted RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 RBM5P52756 815 aaKnown RBP eCLIP3.93□□□□□ -1.78
XRN1-202ENST00000392981 DEUP1Q05D60 604 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 DCTN2Q13561 401 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 POLD3Q15054 466 aaPredicted RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 OSTM1Q86WC4 334 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 GATAD2AQ86YP4 633 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 OR8H3Q8N146 312 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 DTWD2Q8NBA8 298 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 GOT1L1Q8NHS2 421 aaPredicted RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 SLC35A4Q96G79 324 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 TUBGCP5Q96RT8 1024 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 UPF2Q9HAU5 1272 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 LMBRD1Q9NUN5 540 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 PCDHA1Q9Y5I3 950 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 IPO8O15397 1037 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 DNAJA2O60884 412 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 HMOX1P09601 288 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 HSPA7P48741 367 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 RAB12Q6IQ22 244 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 PET117Q6UWS5 81 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 FRMD7Q6ZUT3 714 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 LRRTM4Q86VH4 590 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 CBARPQ8N350 705 aaPredicted RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 TDRD7Q8NHU6 1098 aaKnown RBP3.93□□□□□ -1.78
XRN1-202ENST00000392981 CCDC114Q96M63 670 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 KLHL25Q9H0H3 589 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 GP6Q9HCN6 339 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 MARK1Q9P0L2 795 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
XRN1-202ENST00000392981 POTEFA5A3E0 1075 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 GTPBP1O00178 669 aaKnown RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 KIF5CO60282 957 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 TBC1D4O60343 1298 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 DOK2O60496 412 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 SASH1O94885 1247 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 HOXC12P31275 282 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CPA2P48052 419 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 HARS2P49590 506 aaKnown RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 NRG1Q02297 640 aaPredicted RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 PARP10Q53GL7 1025 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 DNTTIP2Q5QJE6 756 aaKnown RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 CPNE8Q86YQ8 564 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 ZSCAN18Q8TBC5 510 aaPredicted RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 HSPH1Q92598 858 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 THAP9Q9H5L6 903 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 IL18RAPO95256 599 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CHMP24386 653 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 SLC12A2P55011 1212 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 DSG1Q02413 1049 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 ZNF697Q5TEC3 545 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CDH24Q86UP0 819 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 HID1Q8IV36 788 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 ADGRG2Q8IZP9 1017 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 HTRA1Q92743 480 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 SLC13A4Q9UKG4 626 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 SYNPO2Q9UMS6 1093 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.92□□□□□ -1.78
XRN1-202ENST00000392981 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 C2orf71A6NGG8 1288 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 SRGAP2BP0DMP2 458 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 MTHFD2P13995 350 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 PDE6AP16499 860 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 ARL4CP56559 192 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 MECOMQ03112 1051 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 UBE3AQ05086 875 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.92□□□□□ -1.78
XRN1-202ENST00000392981 KHDC1LQ5JSQ8 128 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 PRAMEF13Q5VWM6 474 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 GALNT17Q6IS24 598 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 POTEDQ86YR6 584 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms