RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MEFVO15553 781 aaPredicted RBP13.99□□□□□ -0.17
LCA5-202ENST00000392959 GPS1Q13098 491 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 RHOT1Q8IXI2 618 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 ADSSL1Q8N142 457 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 ANKRD7Q92527 254 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 PMLP29590 882 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 BYSLQ13895 437 aaKnown RBP13.99□□□□□ -0.17
LCA5-202ENST00000392959 QRICH1Q2TAL8 776 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 Q3C1V9 767 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 CELF1Q92879 486 aaKnown RBP13.99□□□□□ -0.17
LCA5-202ENST00000392959 GRAMD1AQ96CP6 724 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 BTBD6Q96KE9 485 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 PNPLA6Q8IY17 1366 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 GGPS1O95749 300 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 CHGBP05060 677 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 EPHB1P54762 984 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 KRT76Q01546 638 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 MAPK6Q16659 721 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 RABL6Q3YEC7 729 aaPredicted RBP13.99□□□□□ -0.17
LCA5-202ENST00000392959 VPS11Q9H270 941 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 SMYD3Q9H7B4 428 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 KLHL8Q9P2G9 620 aaPredicted RBP13.99□□□□□ -0.17
LCA5-202ENST00000392959 SSU72P8A0A1W2PR75 194 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 KPNA7A9QM74 516 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 PI4K2BG5E9Z4 385 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 ZNF185O15231 689 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 P4HBP07237 508 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 SOX5P35711 763 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 FOXO4P98177 505 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 KIF22Q14807 665 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 FRMD5Q7Z6J6 570 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 TC2NQ8N9U0 490 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 RNF139Q8WU17 664 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 PPP1R16BQ96T49 567 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 KLC4Q9NSK0 619 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 ITIH6Q6UXX5 1313 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 ABCA8O94911 1581 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 KRT14P02533 472 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 PDHA1P08559 390 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 SRGNP10124 158 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 MARK3P27448 753 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 QARSP47897 775 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 PDIA2Q13087 525 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 TRIM28Q13263 835 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 NR1I3Q14994 352 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 SLC18A3Q16572 532 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 CCNI2Q6ZMN8 369 aaPredicted RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 ATP11CQ8NB49 1132 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 SNF8Q96H20 258 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 YIPF3Q9GZM5 350 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 ARHGEF37A1IGU5 675 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 KRT7P08729 469 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 TAC1P20366 129 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 MDH1P40925 334 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 TMED1Q13445 227 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 ZNF699Q32M78 642 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 HP1BP3Q5SSJ5 553 aaPredicted RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 FAM182BQ5T319 152 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 ZBED8Q8IZ13 594 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 SH2D3CQ8N5H7 860 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 AP5M1Q9H0R1 490 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 SUN2Q9UH99 717 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 PCSK1NQ9UHG2 260 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 UBE4BO95155 1302 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 XPAP23025 273 aaPredicted RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 TBXAS1P24557 533 aaPredicted RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 EEF1DP29692 281 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 RC3H1Q5TC82 1133 aaKnown RBP13.98□□□□□ -0.17
LCA5-202ENST00000392959 RAD9BQ6WBX8 426 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 C1orf54Q8WWF1 131 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 FAM167BQ9BTA0 163 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 ECT2Q9H8V3 914 aa13.98□□□□□ -0.17
LCA5-202ENST00000392959 CPDO75976 1380 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 RPS6KA4O75676 772 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 NPR1P16066 1061 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 STAT3P40763 770 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 USP11P51784 963 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
LCA5-202ENST00000392959 PDIA5Q14554 519 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 IZUMO3Q5VZ72 239 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 ACAD11Q709F0 780 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 INPP5FQ9Y2H2 1132 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 AXIN2Q9Y2T1 843 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
LCA5-202ENST00000392959 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 PDXKO00764 312 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 CRKP46108 304 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 NOP14P78316 857 aaKnown RBP13.97□□□□□ -0.17
LCA5-202ENST00000392959 FAM161BQ96MY7 647 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
LCA5-202ENST00000392959 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms