RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
RFC4-202ENST00000392481 RNF19AQ9NV58 838 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 DNM3Q9UQ16 869 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 ERLIN2O94905 339 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 ATF7P17544 494 aaPredicted RBP13.13□□□□□ -0.31
RFC4-202ENST00000392481 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
RFC4-202ENST00000392481 NCBP1Q09161 790 aaKnown RBP13.13□□□□□ -0.31
RFC4-202ENST00000392481 MAEAQ7L5Y9 396 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 ABI1Q8IZP0 508 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 RNF169Q8NCN4 708 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 RSPH1Q8WYR4 309 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 AK8Q96MA6 479 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 AAASQ9NRG9 546 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 FAM105AQ9NUU6 356 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
RFC4-202ENST00000392481 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 EYA4O95677 639 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 AXLP30530 894 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 RESTQ13127 1097 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
RFC4-202ENST00000392481 TIGD5Q53EQ6 642 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 HYIQ5T013 277 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
RFC4-202ENST00000392481 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 PRDM6Q9NQX0 595 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 THEGQ9P2T0 379 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 PLAGL2Q9UPG8 496 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 PCDHB12Q9Y5F1 795 aa13.12□□□□□ -0.31
RFC4-202ENST00000392481 VCANP13611 3396 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 XIRP2A4UGR9 3374 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 E9PMD0 336 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 GRM6O15303 877 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 SLC26A4O43511 780 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 STX6O43752 255 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 TSPAN1O60635 241 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 LAG3P18627 525 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
RFC4-202ENST00000392481 AMHR2Q16671 573 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 CDCA2Q69YH5 1023 aaPredicted RBP13.11□□□□□ -0.31
RFC4-202ENST00000392481 MRPL10Q7Z7H8 261 aaKnown RBP13.11□□□□□ -0.31
RFC4-202ENST00000392481 LRRC43Q8N309 656 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 KLHL23Q8NBE8 558 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
RFC4-202ENST00000392481 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 PGBD4Q96DM1 585 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 CWH43Q9H720 699 aa13.11□□□□□ -0.31
RFC4-202ENST00000392481 ITGB1P05556 798 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 NAMPTP43490 491 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
RFC4-202ENST00000392481 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 KCNK18Q7Z418 384 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 ZBTB8OSQ8IWT0 167 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 COLGALT1Q8NBJ5 622 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 MRPL9Q9BYD2 267 aaKnown RBP13.1□□□□□ -0.31
RFC4-202ENST00000392481 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
RFC4-202ENST00000392481 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
RFC4-202ENST00000392481 COG5Q9UP83 839 aa13.1□□□□□ -0.31
RFC4-202ENST00000392481 HSP90AA1P07900 732 aaKnown RBP13.09□□□□□ -0.31
RFC4-202ENST00000392481 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
RFC4-202ENST00000392481 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
RFC4-202ENST00000392481 LONP1P36776 959 aaKnown RBP13.09□□□□□ -0.31
RFC4-202ENST00000392481 UBA7P41226 1012 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 CABP7Q86V35 215 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 LPPQ93052 612 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 HLA-CQ95604 372 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 CSRNP2Q9H175 543 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 FZD8Q9H461 694 aa13.09□□□□□ -0.31
RFC4-202ENST00000392481 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
RFC4-202ENST00000392481 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
RFC4-202ENST00000392481 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms