RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CCDC47Q96A33 483 aaKnown RBP20.63■□□□□ 0.89
CCDC50-202ENST00000392456 IWS1Q96ST2 819 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 DUSP9Q99956 384 aaKnown RBP20.63■□□□□ 0.89
CCDC50-202ENST00000392456 TRPC6Q9Y210 931 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 DOCK5Q9H7D0 1870 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 HERC4Q5GLZ8 1057 aaPredicted RBP20.63■□□□□ 0.89
CCDC50-202ENST00000392456 MICALCLQ6ZW33 695 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 PNMA3Q9UL41 463 aa20.63■□□□□ 0.89
CCDC50-202ENST00000392456 CORO1CQ9ULV4 474 aaPredicted RBP20.63■□□□□ 0.89
CCDC50-202ENST00000392456 NKRFO15226 690 aaKnown RBP eCLIP20.62■□□□□ 0.89
CCDC50-202ENST00000392456 P4HBP07237 508 aaKnown RBP20.62■□□□□ 0.89
CCDC50-202ENST00000392456 RHOXF2BP0C7M4 288 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
CCDC50-202ENST00000392456 EDNRBP24530 442 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 C1orf186Q6ZWK4 172 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 SCLT1Q96NL6 688 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 MMP19Q99542 508 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 RHOXF2Q9BQY4 288 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 DNAJC25-GNG10A0A024R161 153 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 PSMA7O14818 248 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
CCDC50-202ENST00000392456 CASP5P51878 434 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 WDR93Q6P2C0 686 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 ACRBPQ8NEB7 543 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 GPRC5AQ8NFJ5 357 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 YIPF3Q9GZM5 350 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 CDC23Q9UJX2 597 aa20.62■□□□□ 0.89
CCDC50-202ENST00000392456 GOLGA6CA6NDK9 693 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 DCAF8L1A6NGE4 600 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 NDUFAB1O14561 156 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 ARHGAP6O43182 974 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 GOLGA6DP0CG33 693 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 PAPOLAP51003 745 aaKnown RBP20.61■□□□□ 0.89
CCDC50-202ENST00000392456 ZNF157P51786 506 aaPredicted RBP20.61■□□□□ 0.89
CCDC50-202ENST00000392456 ROR2Q01974 943 aaKnown RBP20.61■□□□□ 0.89
CCDC50-202ENST00000392456 KCTD2Q14681 263 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 FAM26FQ5R3K3 315 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 ARHGAP22Q7Z5H3 698 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 SAPCD2Q86UD0 394 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 FUKQ8N0W3 1084 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 P2RX5Q93086 422 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 GOLGA6AQ9NYA3 693 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 ACCSLQ4AC99 568 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 TMEM139Q8IV31 216 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 DHTKD1Q96HY7 919 aaPredicted RBP20.61■□□□□ 0.89
CCDC50-202ENST00000392456 SH3GL2Q99962 352 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 YIPF2Q9BWQ6 316 aa20.61■□□□□ 0.89
CCDC50-202ENST00000392456 RBM47A0AV96 593 aaKnown RBP20.6■□□□□ 0.89
CCDC50-202ENST00000392456 CCNE1P24864 410 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 QARSP47897 775 aaKnown RBP20.6■□□□□ 0.89
CCDC50-202ENST00000392456 STIM1Q13586 685 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 CYFIP1Q7L576 1253 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 CCDC65Q8IXS2 484 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 ALS2CR12Q96Q35 445 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 WDR64B1ANS9 1081 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 TEX33O43247 280 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 ZBED6P86452 979 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 KRT76Q01546 638 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 DRP2Q13474 957 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 TMEM63BQ5T3F8 832 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 SFR1Q86XK3 245 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 RASAL3Q86YV0 1011 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 TRIM58Q8NG06 486 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 TRIM47Q96LD4 638 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 MROH8Q9H579 483 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 TMEM165Q9HC07 324 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 SLC45A1Q9Y2W3 748 aa20.6■□□□□ 0.89
CCDC50-202ENST00000392456 IGF2BP3O00425 579 aaKnown RBP eCLIP20.59■□□□□ 0.89
CCDC50-202ENST00000392456 GGCXP38435 758 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 GNPTABQ3T906 1256 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 CENPPQ6IPU0 288 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 TRIM42Q8IWZ5 723 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 ATL2Q8NHH9 583 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 SPAG5Q96R06 1193 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 JPH1Q9HDC5 661 aaPredicted RBP20.59■□□□□ 0.89
CCDC50-202ENST00000392456 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
CCDC50-202ENST00000392456 ZNF862O60290 1169 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 STAM2O75886 525 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 COBLL1Q53SF7 1204 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 MAEAQ7L5Y9 396 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 GUF1Q8N442 669 aaKnown RBP20.59■□□□□ 0.89
CCDC50-202ENST00000392456 SCFD1Q8WVM8 642 aa20.59■□□□□ 0.89
CCDC50-202ENST00000392456 AGPSO00116 658 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 TPD52L2O43399 206 aaKnown RBP20.58■□□□□ 0.89
CCDC50-202ENST00000392456 RNF8O76064 485 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 FERP16591 822 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 MUTP22033 750 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 ZNF746Q6NUN9 644 aaPredicted RBP20.58■□□□□ 0.89
CCDC50-202ENST00000392456 NELFCDQ8IXH7 590 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 SLC9A2Q9UBY0 812 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 PCDHA10Q9Y5I2 948 aa20.58■□□□□ 0.89
CCDC50-202ENST00000392456 ZNFX1Q9P2E3 1918 aaKnown RBP20.58■□□□□ 0.88
CCDC50-202ENST00000392456 MCM3APO60318 1980 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 CBFA2T2O43439 604 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 ARIH2O95376 493 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 ICAM3P32942 547 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 JAK3P52333 1124 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 NPEPPSP55786 919 aa20.58■□□□□ 0.88
CCDC50-202ENST00000392456 ACTR2P61160 394 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms