RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 LAMC2Q13753 1193 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 RGMBQ6NW40 437 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 TMEM143Q96AN5 459 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 MAML3Q96JK9 1138 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 PCIF1Q9H4Z3 704 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 PASKQ96RG2 1323 aa12.5□□□□□ -0.41
SMARCAL1-203ENST00000392128 EIF3CLB5ME19 914 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 GAS2O43903 313 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC9A1P19634 815 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 GLRA2P23416 452 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 ADSSP30520 456 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 PLCB4Q15147 1175 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 KLHDC7AQ5VTJ3 777 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 TAS1R3Q7RTX0 852 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 MYRIPQ8NFW9 859 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 ASAP3Q8TDY4 903 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 EIF3CQ99613 913 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 NLRC4Q9NPP4 1024 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 GCNT4Q9P109 453 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 GH1P01241 217 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 UCHL3P15374 230 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 KRT83P78385 493 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 TRIM50Q86XT4 487 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 SIX2Q9NPC8 291 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC5A4Q9NY91 659 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 MYO6Q9UM54 1294 aa12.49□□□□□ -0.41
SMARCAL1-203ENST00000392128 ZBTB42B2RXF5 422 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 SLC10A3P09131 477 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 GARTP22102 1010 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 VAMP7P51809 220 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 APBA1Q02410 837 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 MAPK8IP2Q13387 824 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 CCDC42Q96M95 316 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 FBXL18Q96ME1 805 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 TINF2Q9BSI4 451 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 AIPL1Q9NZN9 384 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 CPA4Q9UI42 421 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 IGKV6-21A0A0C4DH24 114 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 SSU72P8A0A1W2PR75 194 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 P4HA2O15460 535 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 N4BP1O75113 896 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 PIGRP01833 764 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 ACTN1P12814 892 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 MARK3P27448 753 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 INHBEP58166 350 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 TAF1CQ15572 869 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 CBWD6Q4V339 395 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 CBWD3Q5JTY5 395 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 CBWD5Q5RIA9 395 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 IER5Q5VY09 327 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 DEPTORQ8TB45 409 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 TCP11Q8WWU5 503 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 ABHD16BQ9H3Z7 469 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 LZTFL1Q9NQ48 299 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 DNAI1Q9UI46 699 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 DAAM1Q9Y4D1 1078 aa12.48□□□□□ -0.41
SMARCAL1-203ENST00000392128 A0A0U1RQJ8 604 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 PMM2O15305 246 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 HBP1O60381 514 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 IPO7O95373 1038 aaKnown RBP12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 LCA5LO95447 670 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 SERPING1P05155 500 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 GTF2F1P35269 517 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ARHGAP25P42331 645 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 MYL7Q01449 175 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ENPEPQ07075 957 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 STRN3Q13033 797 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 SNRNP35Q16560 246 aaKnown RBP12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ARHGAP29Q52LW3 1261 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 MORN1Q5T089 497 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ZSWIM2Q8NEG5 633 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 NPLOC4Q8TAT6 608 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ATRIPQ8WXE1 791 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
SMARCAL1-203ENST00000392128 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms