RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TRIM16O95361 564 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 RBBP7Q16576 425 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 ATP6V0A1Q93050 837 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 AKAP10O43572 662 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 PCP11498 1178 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF555Q8NEP9 628 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 ZC3H15Q8WU90 426 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 CHP1Q99653 195 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 SYNDIG1LA6NDD5 238 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 FAM107AO95990 144 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 PTPREP23469 700 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 SF3B3Q15393 1217 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 CERKLQ49MI3 558 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 TPP2P29144 1249 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 TFAMQ00059 246 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 CHRNDQ07001 517 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 PROSER3Q2NL68 480 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 TTC30BQ8N4P2 665 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 UHRF1BP1LA0JNW5 1464 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 NQO1P15559 274 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 RPS6P62753 249 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 DNAL1Q4LDG9 190 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 WNT8AQ9H1J5 351 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 GREM2Q9H772 168 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 LIMA1Q9UHB6 759 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 PAPOLAP51003 745 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 PDP2Q9P2J9 529 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 MYBL1P10243 752 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 SSTR3P32745 418 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 SCTRP47872 440 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 KCNH2Q12809 1159 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 PNKPQ96T60 521 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 SEPT3Q9UH03 358 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 DHX38Q92620 1227 aaKnown RBP17.16■□□□□ 0.34
SHANK1-204ENST00000391814 EDEM3Q9BZQ6 932 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 HEY1Q9Y5J3 304 aa17.16■□□□□ 0.34
SHANK1-204ENST00000391814 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF746Q6NUN9 644 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-204ENST00000391814 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-204ENST00000391814 NEDD4P46934 1319 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 NEMP1O14524 444 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 MAFGO15525 162 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 CIAO1O76071 339 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 PMLP29590 882 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 ASPRV1Q53RT3 343 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 ZRANB2O95218 330 aaKnown RBP eCLIP17.15■□□□□ 0.34
SHANK1-204ENST00000391814 VCPP55072 806 aaKnown RBP17.15■□□□□ 0.34
SHANK1-204ENST00000391814 MECOMQ03112 1051 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 TRIP10Q15642 601 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 FRA10AC1Q70Z53 315 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 RAD54LQ92698 747 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 EME1Q96AY2 570 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 RNPEPQ9H4A4 650 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 RAD51CO43502 376 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 ATP6V1G2O95670 118 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 GTF2IP78347 998 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 DMPKQ09013 629 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 SYCP2LQ5T4T6 812 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 NACC1Q96RE7 527 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 PAMP19021 973 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 SERPINB1P30740 379 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 S100A5P33763 92 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 OSTNP61366 133 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 COASYQ13057 564 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 SIKE1Q9BRV8 207 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 CCDC87Q9NVE4 849 aa17.15■□□□□ 0.34
SHANK1-204ENST00000391814 PLOD1Q02809 727 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 RCN1Q15293 331 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 PI16Q6UXB8 463 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 ATXN7L3BQ96GX2 97 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 TMEM51Q9NW97 253 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 PRDM4Q9UKN5 801 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 GGPS1O95749 300 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 DLGAP3O95886 979 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 FTLP02792 175 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 ZCCHC18P0CG32 403 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 POU5F1BQ06416 359 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 STAT4Q14765 748 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 C4orf33Q8N1A6 199 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 MARCOQ9UEW3 520 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 SCNN1DP51172 638 aa17.14■□□□□ 0.33
SHANK1-204ENST00000391814 PRPF39Q86UA1 669 aaKnown RBP17.14■□□□□ 0.33
SHANK1-204ENST00000391814 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms