RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PTPROQ16827 1216 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 UBXN11Q5T124 520 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 ARL6IP4Q66PJ3 421 aaKnown RBP12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 MCPH1Q8NEM0 835 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 THEGQ9P2T0 379 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 PP2D1A8MPX8 630 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 K7ELQ4 463 aaPredicted RBP12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 USO1O60763 962 aaKnown RBP12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 SKIP12755 728 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 PDCP20941 246 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 SYT1P21579 422 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 DNAJB1P25685 340 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 CDC25AP30304 524 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 MBTD1Q05BQ5 628 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 KLHL23Q8NBE8 558 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 RSPH1Q8WYR4 309 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 ASB2Q96Q27 587 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 POLR3FQ9H1D9 316 aaPredicted RBP12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 GPRC5CQ9NQ84 441 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 COG5Q9UP83 839 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 KIAA1024Q9UPX6 916 aa12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
IGHV4-28-201ENST00000390612 MEIS3P2A8K0S8 358 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 TSPAN1O60635 241 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 EYA4O95677 639 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 AXLP30530 894 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 RAB27AP51159 221 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 MRPS5P82675 430 aaKnown RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 TFDP1Q14186 410 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 TIGD5Q53EQ6 642 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 CDCA2Q69YH5 1023 aaPredicted RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 KCNK18Q7Z418 384 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 COLGALT1Q8NBJ5 622 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 SNX29Q8TEQ0 813 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 BSNDQ8WZ55 320 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 CCDC43Q96MW1 224 aaKnown RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 BHMT2Q9H2M3 363 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 ALG13Q9NP73 1137 aaKnown RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 PCDHB2Q9Y5E7 798 aa12.64□□□□□ -0.39
IGHV4-28-201ENST00000390612 TRIOO75962 3097 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 ARHGEF35A5YM69 484 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 OFD1O75665 1012 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 BMP1P13497 986 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 TFF2Q03403 129 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 UBE3AQ05086 875 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 RESTQ13127 1097 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 FAM187BQ17R55 369 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 CTC1Q2NKJ3 1217 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 AGMOQ6ZNB7 445 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 DAW1Q8N136 415 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 SMG8Q8ND04 991 aaKnown RBP12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 LPPQ93052 612 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 HLA-CQ95604 372 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 CCDC51Q96ER9 411 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 PNMA5Q96PV4 448 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 FZD8Q9H461 694 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 AAASQ9NRG9 546 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 PCDHB12Q9Y5F1 795 aa12.63□□□□□ -0.39
IGHV4-28-201ENST00000390612 CITO14578 2027 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 A0A1B0GUA9 196 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 E9PMD0 336 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 INO80B-WBP1J3KQ70 363 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 DLL1O00548 723 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 INPPL1O15357 1258 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 SLC26A4O43511 780 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 FGF18O76093 207 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 BMP15O95972 392 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 ARF4P18085 180 aaPredicted RBP12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 LAG3P18627 525 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 NCLP19338 710 aaKnown RBP12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 PLCB3Q01970 1234 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 PTPAQ15257 358 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 KCNT2Q6UVM3 1135 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 C1orf186Q6ZWK4 172 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 MAEAQ7L5Y9 396 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 LRRC43Q8N309 656 aa12.62□□□□□ -0.39
IGHV4-28-201ENST00000390612 POF1BQ8WVV4 589 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms